Factsheet for HORVU5Hr1G106250.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, cytosol

Predictor Summary:

vacuole 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, vacuole
Any Predictor:	cytosol, mitochondrion, vacuole
MultiLoc:	vacuole
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	95.0	90.15
TraesCS5B01G445500.1	Wheat	cytosol	90.0	85.25
TraesCS5A01G441600.1	Wheat	cytosol	89.62	84.88
TraesCS5D01G448800.1	Wheat	cytosol	88.65	84.28
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	85.58	79.04
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	83.08	76.19
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	30.58	70.98
HORVU5Hr1G106260.1	Barley	cytosol	44.04	63.43
Zm00001d016558_P001	Maize	plastid	45.96	55.32
KXG30265	Sorghum	plastid	65.0	52.81
HORVU3Hr1G007460.1	Barley	cytosol	62.88	48.52
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	58.46	43.62
HORVU4Hr1G003220.3	Barley	cytosol	47.88	33.74
HORVU2Hr1G113150.1	Barley	cytosol	28.46	27.61
HORVU5Hr1G056740.1	Barley	vacuole	29.04	25.51
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	28.46	25.34
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	29.04	25.0
HORVU1Hr1G023120.1	Barley	extracellular	27.31	24.7
HORVU4Hr1G063790.23	Barley	vacuole	26.92	24.65
HORVU4Hr1G070260.12	Barley	vacuole	28.46	24.22
HORVU2Hr1G021350.12	Barley	mitochondrion	49.23	23.21

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	UniProt:A0A287SLW0	ncoils:Coil	InterPro:GH10
InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0031176	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU5Hr1G106250
EnsemblPlants:HORVU5Hr1G106250.2	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	ScanProsite:PS00591	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF17	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI000B47BF7A
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:623698300..623699953

Molecular Weight (calculated)

57719.7 Da

IEP (calculated)

6.364

GRAVY (calculated)

-0.252

Length

520 amino acids

Sequence
(BLAST)

001: MLPVTVAVGG NKPSGRYVLV AGRADEEDGL RLPIPVDTLK PRLTYRVAGW ISLGAARGTS HPVRIDLGVE DNGNETLVEC GAVCAKEGGW SEIMGAFRLR
101: TEPRSAAVYV HGAPAGVDVK VMDLRVYPVD HKARFRQLKD KTDKARKRDV ILKLGTPAGA GAGAAASVRV VQLDNAFPFG TCINTSVIQK PAFLDFFTNH
201: LDWAVFENEL KWYHTEVQQG QLNYADADAL LAFCDRLGKT VRGHCVFWSV DGDVQQWVKN LNKDQLRSAM QSRLEGLVSR YAGRFKHYDV NNEMLHGRFF
301: RDRLGDEDVP AYMFKEVARL DPEPALFVND YNVECGNDPN ATPEKYAEQV AWLQSCGAVV RGIGLQGHVQ NPVGEVICAA LDRLAKTGVP IWFTELDVPE
401: YDVGLRAKDL EVVLREAYAH PAVEGIVFWG FMQGTMWRQN AWLVDADGTV NEAGQMFLNL QKEWKTDARG NFDGDGNFKF RGFYGRYVVE VTTAKGKQIL
501: KTFRVEKGDS TPLVVDLADA

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.