Factsheet for HORVU4Hr1G063790.23

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G071100.2	Wheat	vacuole	83.98	85.03
TraesCS4B01G227000.1	Wheat	vacuole	83.8	84.85
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	83.63	84.67
EER95184	Sorghum	vacuole	74.47	75.54
Os03t0243700-01	Rice	cytosol	52.64	74.01
Zm00001d028398_P003	Maize	golgi, vacuole	73.42	73.55
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	47.71	44.87
HORVU2Hr1G113150.1	Barley	cytosol	30.81	32.65
HORVU1Hr1G023120.1	Barley	extracellular	30.99	30.61
HORVU5Hr1G056740.1	Barley	vacuole	31.87	30.57
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	31.34	30.48
HORVU4Hr1G070260.12	Barley	vacuole	32.57	30.28
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	24.65	26.92
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	25.7	25.93
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	25.88	25.93
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	24.65	25.55
HORVU4Hr1G003220.3	Barley	cytosol	28.52	21.95
HORVU3Hr1G007460.1	Barley	cytosol	25.7	21.66
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	25.35	20.66
HORVU5Hr1G106260.1	Barley	cytosol	12.5	19.67
HORVU2Hr1G021350.12	Barley	mitochondrion	28.35	14.6

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A287PCN3	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU4Hr1G063790	EnsemblPlants:HORVU4Hr1G063790.23	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF21	SMART:SM00633
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B462E55	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:534229127..534232654

Molecular Weight (calculated)

64063.3 Da

IEP (calculated)

8.634

GRAVY (calculated)

-0.299

Length

568 amino acids

Sequence
(BLAST)

001: MRSRGFALSH AAVFLAWWMV HCGGGLVAAV PPDGWYDYTA HTDCRGHPEP AQYNGGILKY GNGEDPNGYK TTETGVLSPA FVVYNLNKST MYTFSGWVKL
101: EGSSSALITA RLAPDNSGTR CIGTVLARSD CWAFLKGGFV LDWPTQTSVI FFQNADRTPM KITIASGSLQ PFTTDQWSMH QKDTIRKRRK RMATIHVADP
201: HGTRVVGASV SVQQTAKDFP LGSAIASTIL GNDAYQKWFV ERFNAAVFED ELKWYSTEPA SGLLRFDVPD QMLAFVRSHR VMVRGHNIFW ENQDATPRWV
301: KGLSPEDLRS AVNTRIQSLM TRYRGEFAHW DVNNEMLHFN FYEQRLGPNA TMDFFSVAQD ADPLATLFMN EYNVVETCDD ASSTVDAYVA RLKDLRAGGA
401: VLEGIGLEGH FSKPNIPYMR AVLDKLATLN LPIWFTEIDI NNKFDAQTQA VYLEQVLREA YAHPAVSGVM LWTALHESGC RPDGRARRLQ LQRLPRRVRR
501: HRQRRQHLQA GHLLAVSRGR DQAHHHSDMT LVLVFRSICV ARCCCPHLLP RASTSADTYR RMCDAWCY

Best Arabidopsis Sequence Match ( AT4G33830.1 )
(BLAST)

001: MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV

Arabidopsis Description

Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.