Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G227700.1 | Wheat | plasma membrane, vacuole | 97.5 | 97.5 |
| TraesCS4B01G227000.1 | Wheat | vacuole | 96.79 | 96.79 |
| Os03t0243700-01 | Rice | cytosol | 62.92 | 87.38 |
| HORVU4Hr1G063790.23 | Barley | vacuole | 85.03 | 83.98 |
| EER95184 | Sorghum | vacuole | 82.53 | 82.68 |
| Zm00001d028398_P003 | Maize | golgi, vacuole | 81.64 | 80.78 |
| TraesCS2A01G061600.1 | Wheat | extracellular, plasma membrane, vacuole | 53.65 | 54.14 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 37.97 | 37.11 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 38.15 | 36.71 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 36.9 | 35.26 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 36.9 | 35.26 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 35.29 | 34.49 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 36.36 | 33.5 |
| TraesCS5A01G441700.1 | Wheat | cytosol | 29.59 | 30.35 |
| TraesCS5A01G441600.1 | Wheat | cytosol | 29.23 | 29.87 |
| TraesCS5A01G441400.1 | Wheat | cytosol | 29.06 | 29.42 |
| TraesCS3A01G038200.1 | Wheat | cytosol | 29.23 | 28.87 |
| TraesCS3A01G038000.1 | Wheat | cytosol | 28.7 | 26.14 |
| TraesCS4A01G292300.1 | Wheat | cytosol | 32.09 | 24.42 |
| TraesCS2A01G122200.1 | Wheat | mitochondrion | 31.19 | 15.91 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 | PRINTS:PR00134 | PFscan:PS51760 |
| PANTHER:PTHR31490 | PANTHER:PTHR31490:SF21 | SMART:SM00633 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS4A01G071100 | EnsemblPlants:TraesCS4A01G071100.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:68467477..68470195
Molecular Weight (calculated)
62403.8 Da
IEP (calculated)
6.348
GRAVY (calculated)
-0.228
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSRGSFALG HAVVFLAWLM VHCGGGLVGA VPPDGWYDYT AHTDCRGRPE PAQYNGGILK YGNGDDPNGY KTTETGVLSP AFVVYNLNKS TMYTFSGWVK
101: LEGSPSALIT ARLAPDNSGT RCIGTVLARS NCWAFLKGGF VLDWPTQTSV IFFQNADRTP MKITTASASL QPFTTDQWSM HQKDTIRKRR KRMATIHVAD
201: PHGTRVVGAS VSVEQTSKDF PLGSAIASTI LGNDAYQKWF VERFNAAVFE DELKWYSTEP ASGLLRFDVP DQMLAFVRSH RVMVRGHNIF WENQDATPRW
301: VKGLSPEDLR SAVNTRIQSL MTRYRGEFAH WDVNNEMLHF NFYEQRLGAN ATMEFFSVAQ DADPLATLFM NEYNVVETCD DASSTVDAYV ARLKDLRAGG
401: AVLEGIGLEG HFSRPNIPYM RAVLDKLATL NLPIWFTEID INNKFDAQTQ AVYLEQVLRE AYAHPAVSGV MLWTALHEGG CYQMCLTDWN LKNLPVGDVV
501: DRLLQEWQTG QVAGPTDAHG AYSFSGYLGE YVVTVNAGNT SKQATFSLSP GDETRHITVQ I
101: LEGSPSALIT ARLAPDNSGT RCIGTVLARS NCWAFLKGGF VLDWPTQTSV IFFQNADRTP MKITTASASL QPFTTDQWSM HQKDTIRKRR KRMATIHVAD
201: PHGTRVVGAS VSVEQTSKDF PLGSAIASTI LGNDAYQKWF VERFNAAVFE DELKWYSTEP ASGLLRFDVP DQMLAFVRSH RVMVRGHNIF WENQDATPRW
301: VKGLSPEDLR SAVNTRIQSL MTRYRGEFAH WDVNNEMLHF NFYEQRLGAN ATMEFFSVAQ DADPLATLFM NEYNVVETCD DASSTVDAYV ARLKDLRAGG
401: AVLEGIGLEG HFSRPNIPYM RAVLDKLATL NLPIWFTEID INNKFDAQTQ AVYLEQVLRE AYAHPAVSGV MLWTALHEGG CYQMCLTDWN LKNLPVGDVV
501: DRLLQEWQTG QVAGPTDAHG AYSFSGYLGE YVVTVNAGNT SKQATFSLSP GDETRHITVQ I
001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI
Arabidopsis Description
At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.