Factsheet for Zm00001d028398_P003

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95184	Sorghum	vacuole	95.94	97.14
Os03t0243700-01	Rice	cytosol	62.61	87.87
TraesCS4B01G227000.1	Wheat	vacuole	82.54	83.42
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	82.01	82.89
TraesCS4A01G071100.2	Wheat	vacuole	80.78	81.64
HORVU4Hr1G063790.23	Barley	vacuole	73.55	73.42
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	53.09	52.35
Zm00001d039958_P001	Maize	cytosol	18.17	38.58
Zm00001d039946_P001	Maize	cytosol	27.34	37.17
Zm00001d028103_P001	Maize	extracellular, vacuole	37.92	37.07
Zm00001d048151_P001	Maize	vacuole	37.92	37.01
Zm00001d030468_P001	Maize	cytosol	35.63	34.3
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	37.57	32.37
Zm00001d016558_P001	Maize	plastid	24.34	31.94
Zm00001d013561_P001	Maize	extracellular	32.98	25.0
Zm00001d019586_P008	Maize	mitochondrion	32.28	16.65

Protein Annotations

EntrezGene:100272986	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A1D6JVR9	InterPro:CarboxyPept-like_regulatory	InterPro:GH10
InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	ProteinID:ONL95892.1	PFAM:PF00331
PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF21	SMART:SM00633
SUPFAM:SSF49464	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0008455E10	EnsemblPlantsGene:Zm00001d028398	EnsemblPlants:Zm00001d028398_P003
EnsemblPlants:Zm00001d028398_T003	:	:	:	:	:

Description

Glycosyl hydrolase family 10 protein

Coordinates

chr1:+:33451482..33454805

Molecular Weight (calculated)

63560.3 Da

IEP (calculated)

6.195

GRAVY (calculated)

-0.200

Length

567 amino acids

Sequence
(BLAST)

001: MKMHRFALRG LGFLVLWMLH CGSELAAAVP PDGWYDYSAY TDVYLRGVQC RGQPEPALYN GGILKFGSSG GDPDGYRTTE TGVFSPAFVV YNLNKTTMYT
101: FSCWVKLEGA YSALITARLA PDNTGARCIA TVVARSDCWA FVKGGFVLDW PTQTSVIFFQ NADKTPMKIT VASGSLQPFT TDQWAMHQQD TIRKRRKRVA
201: TIHVADPQGA RVVGASVSVQ QTAKDFPIGS AIASTILGNQ AYQQWFVDRF NAAVFEDELK WYSTEPMSGQ LRFDVPDQML AFVRSHRVMV RGHNIFWENQ
301: DATPRWVKNL TADDLRAAVN TRIQSLMTRY RGEFAHWDVN NEMLHYNFYE QRLGPNASAE FFSVAQDADP LATLFMNEYN VIETCDDPFS TVDTYVSKLK
401: DLRSAGAILE GIGLEGHFSK PNIPLMRAIL DKLATLGLPI WFTEIDISNK FDAQTQAAYL EQVLREAYSH PAVSGVMLWT ALHPSGCYQM CLTDWNLSNL
501: PTGDVVDRLL NEWRTLQAAG QTDAHGAYSF TGYLGEYVLT VSYNNRTTQS TFSLSPGDET RHINVQM

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.