Factsheet for Zm00001d048152_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

vacuole 1
mitochondrion 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	extracellular, mitochondrion, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39936	Sorghum	extracellular, vacuole	82.67	94.28
Os03t0201500-01	Rice	vacuole	68.39	78.4
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	67.17	77.54
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	67.48	77.35
TraesCS4B01G259100.1	Wheat	vacuole	66.72	77.02
Zm00001d028103_P001	Maize	extracellular, vacuole	57.75	65.52
Zm00001d048151_P001	Maize	vacuole	56.53	64.03
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	46.35	53.6
VIT_03s0091g00900.t01	Wine grape	cytosol	44.07	52.06
Zm00001d030468_P001	Maize	cytosol	45.74	51.1
VIT_03s0091g00950.t01	Wine grape	cytosol	42.25	50.36
KRH29254	Soybean	cytosol	43.31	50.35
VIT_03s0091g00880.t01	Wine grape	vacuole	45.29	50.08
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	41.79	49.91
CDY69164	Canola	vacuole	43.31	49.74
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	43.31	49.74
Bra034585.1-P	Field mustard	vacuole	43.31	49.74
CDY28323	Canola	vacuole	42.1	49.73
CDY48434	Canola	vacuole	43.01	49.39
AT4G33830.1	Thale cress	vacuole	43.16	49.31
AT4G33840.1	Thale cress	vacuole	43.01	49.13
Bra034584.1-P	Field mustard	vacuole	42.71	49.04
AT4G33860.1	Thale cress	plasma membrane, vacuole	42.86	48.96
KRH29253	Soybean	extracellular, vacuole	40.88	47.53
CDY49378	Canola	plasma membrane, vacuole	41.19	47.38
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	39.82	45.64
CDY48433	Canola	vacuole	40.12	45.6
Solyc01g106990.1.1	Tomato	vacuole	39.67	45.23
CDY28325	Canola	vacuole	39.67	45.08
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	39.06	43.93
PGSC0003DMT400037865	Potato	cytosol	37.54	43.49
Solyc05g051260.2.1	Tomato	golgi, vacuole	37.54	42.81
Bra017609.1-P	Field mustard	nucleus	42.1	41.53
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	33.59	38.43
Zm00001d028398_P003	Maize	golgi, vacuole	32.37	37.57
Zm00001d039946_P001	Maize	cytosol	20.21	31.89
Zm00001d039958_P001	Maize	cytosol	12.92	31.84
CDX72434	Canola	cytosol, vacuole	41.95	31.47
GSMUA_Achr1P12520_001	Banana	mitochondrion	41.95	30.13
Zm00001d016558_P001	Maize	plastid	18.54	28.24
GSMUA_Achr1P12510_001	Banana	cytosol	40.43	27.77
Solyc01g106980.1.1	Tomato	cytosol	38.75	23.1
Zm00001d013561_P001	Maize	extracellular	25.23	22.19
Zm00001d019586_P008	Maize	mitochondrion	26.6	15.92

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A1D6PI50	ProteinID:AQL08997.1	InterPro:CenC_carb-bd	InterPro:GH10
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PFAM:PF02018	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF13	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI00084251FB	EnsemblPlantsGene:Zm00001d048152	EnsemblPlants:Zm00001d048152_P001	EnsemblPlants:Zm00001d048152_T001
SEG:seg	:	:	:	:	:

Description

asg12aGlycosyl hydrolase family 10 protein

Coordinates

chr9:-:150994557..150997566

Molecular Weight (calculated)

72132.1 Da

IEP (calculated)

5.646

GRAVY (calculated)

-0.126

Length

658 amino acids

Sequence
(BLAST)

001: MVCFACRSVE TECLPCRDRM TKAKLAFWLG WIALLQGCMV KSSLPYEYDY SASIEASPCV PYMTACAMHD NCTCPSTSRC LPEPLEPQYG GGVLRNADFS
101: AGLRGWSAFG YGSIAESTSA AGNGFAVALN RTRPYQSVSQ KVYLQADTHY TLSAWLQVSD GGADVRAVVK TVGDFVHAGG GVAKAGCWSM LKGGLTAASS
201: GPAELYFEVG TRSSVDCFCF TDVRERVRPR QPIEMIYDTI VRPYYVQSNA TVDLWVDSVS LKPFSKDEWT AHRAESVSAA RKKAVRLQAT DSAGNPLEGA
301: AVSLDAVRTN FPLGAAVSRY ILTNSAYQTW FASRFAVATF ENEMKWYSTE PAPGQEDYTV PDAMMAFAKS NGIAVRGHNV FWDQPSQQPR WVQSLPYPQL
401: LAAASRRIRS VVSRYAGQVI GWDVVNENLH FNFYEGRFGW DASTAFYAAA RLLDAGSALM FMNEFNTVEQ PGDMAALPAR YLQRLQQIIA AYPENGAGMA
501: IGLEGHFTTN PNIPYMRAAL DTLAQAGIPV WLTEVDVAPG PSQAQHLEEV LREAYAHPAV QGIVIWSAWR PEGCYVMCLT DNSFNNLPQG DVVDRLIAEW
601: RATPRAGSTD AQGYFEAELV HGEYKVTVSH PALNSSISRS VKVELGSGSD HYFIDMQV

Best Arabidopsis Sequence Match ( AT4G33840.1 )
(BLAST)

001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV

Arabidopsis Description

At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.