Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G33840.1 | Thale cress | vacuole | 83.33 | 83.33 |
| CDY69164 | Canola | vacuole | 78.47 | 78.88 |
| CDY28323 | Canola | vacuole | 75.52 | 78.1 |
| Bra034585.1-P | Field mustard | vacuole | 77.43 | 77.84 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.91 | 77.31 |
| CDY48434 | Canola | vacuole | 76.74 | 77.14 |
| AT4G33860.1 | Thale cress | plasma membrane, vacuole | 77.08 | 77.08 |
| Bra034584.1-P | Field mustard | vacuole | 76.39 | 76.79 |
| CDY49378 | Canola | plasma membrane, vacuole | 73.09 | 73.6 |
| Bra017609.1-P | Field mustard | nucleus | 76.04 | 65.67 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 52.43 | 54.22 |
| KRH29254 | Soybean | cytosol | 53.12 | 54.06 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 55.38 | 53.61 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 51.22 | 53.54 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 49.48 | 51.63 |
| Zm00001d028103_P001 | Maize | extracellular, vacuole | 51.39 | 51.03 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 50.17 | 50.79 |
| KRH29253 | Soybean | extracellular, vacuole | 49.83 | 50.71 |
| EER92683 | Sorghum | vacuole | 50.87 | 50.17 |
| CDX72434 | Canola | cytosol, vacuole | 76.22 | 50.06 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 49.48 | 50.0 |
| Os03t0201901-00 | Rice | cytosol | 49.48 | 50.0 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.31 | 49.82 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 50.17 | 49.57 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 50.17 | 49.57 |
| KXG39936 | Sorghum | extracellular, vacuole | 49.65 | 49.57 |
| Zm00001d048151_P001 | Maize | vacuole | 49.83 | 49.4 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.13 | 49.3 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 49.65 | 49.06 |
| Os03t0201500-01 | Rice | vacuole | 48.61 | 48.78 |
| Os10t0351700-01 | Rice | plasma membrane | 48.26 | 47.85 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 49.83 | 46.97 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 46.53 | 46.69 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 43.4 | 46.64 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 47.92 | 46.62 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 46.35 | 46.52 |
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 47.22 | 46.5 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 46.35 | 46.43 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 46.18 | 46.34 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 47.22 | 46.34 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 47.05 | 46.17 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 47.05 | 46.17 |
| Zm00001d030468_P001 | Maize | cytosol | 46.88 | 45.84 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 46.35 | 45.72 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 47.74 | 45.68 |
| Solyc01g106990.1.1 | Tomato | vacuole | 45.14 | 45.06 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 44.79 | 44.95 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 44.79 | 44.95 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 46.53 | 44.01 |
| PGSC0003DMT400037865 | Potato | cytosol | 43.06 | 43.66 |
| Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 49.31 | 43.16 |
| AT4G38300.1 | Thale cress | mitochondrion | 20.66 | 42.96 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 42.88 | 42.81 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 42.88 | 42.22 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 41.67 | 41.96 |
| Os10t0351600-00 | Rice | cytosol | 41.49 | 40.72 |
| AT4G38650.1 | Thale cress | vacuole | 38.02 | 38.97 |
| AT4G33810.3 | Thale cress | extracellular, vacuole | 37.5 | 37.96 |
| Os03t0201800-01 | Rice | extracellular | 37.85 | 37.46 |
| AT4G33820.1 | Thale cress | extracellular, vacuole | 35.76 | 36.14 |
| AT2G14690.1 | Thale cress | vacuole | 34.38 | 34.74 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 47.74 | 30.02 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 45.49 | 27.35 |
| Solyc01g106980.1.1 | Tomato | cytosol | 44.79 | 23.37 |
| AT4G08160.1 | Thale cress | cytosol | 25.35 | 19.41 |
| AT1G58370.2 | Thale cress | cytosol | 26.91 | 16.4 |
| AT1G10050.3 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 26.04 | 13.7 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | EntrezGene:829525 | ProteinID:AEE86282.1 | ArrayExpress:AT4G33830 |
| EnsemblPlantsGene:AT4G33830 | RefSeq:AT4G33830 | TAIR:AT4G33830 | RefSeq:AT4G33830-TAIR-G | EnsemblPlants:AT4G33830.1 | TAIR:AT4G33830.1 |
| Unigene:At.54594 | InterPro:CenC_carb-bd | UniProt:F4JJU7 | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | RefSeq:NP_195109.2 | PFAM:PF00331 |
| PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | SMART:SM00633 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0001739450 | SEG:seg | : | : |
Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU7]
Coordinates
chr4:-:16220189..16222681
Molecular Weight (calculated)
64873.4 Da
IEP (calculated)
6.464
GRAVY (calculated)
-0.351
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.