Factsheet for HORVU5Hr1G056740.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 4
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	89.36	90.12
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	89.36	90.12
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	88.85	89.61
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	83.61	84.76
Os10t0351700-01	Rice	plasma membrane	74.16	75.56
Zm00001d030468_P001	Maize	cytosol	72.97	73.34
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	72.3	71.1
HORVU2Hr1G113150.1	Barley	cytosol	57.6	63.62
HORVU1Hr1G023120.1	Barley	extracellular	60.14	61.91
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	46.45	48.33
HORVU4Hr1G070260.12	Barley	vacuole	49.83	48.28
KRH29254	Soybean	cytosol	46.11	48.23
AT4G33830.1	Thale cress	vacuole	46.62	47.92
CDY28323	Canola	vacuole	44.76	47.58
AT4G33840.1	Thale cress	vacuole	46.11	47.4
Bra034585.1-P	Field mustard	vacuole	45.78	47.29
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	45.61	47.12
AT4G33860.1	Thale cress	plasma membrane, vacuole	45.78	47.05
CDY69164	Canola	vacuole	45.44	46.95
CDY48434	Canola	vacuole	45.27	46.77
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	43.41	46.64
Bra034584.1-P	Field mustard	vacuole	44.93	46.42
KRH29253	Soybean	extracellular, vacuole	42.91	44.88
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	43.41	44.77
CDY48433	Canola	vacuole	43.75	44.73
CDY49378	Canola	plasma membrane, vacuole	43.07	44.58
CDY28325	Canola	vacuole	43.58	44.56
VIT_03s0091g00900.t01	Wine grape	cytosol	41.89	44.52
VIT_03s0091g00880.t01	Wine grape	vacuole	43.92	43.7
Solyc01g106990.1.1	Tomato	vacuole	42.23	43.33
VIT_03s0091g00950.t01	Wine grape	cytosol	40.03	42.93
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	41.22	41.71
Solyc05g051260.2.1	Tomato	golgi, vacuole	39.36	40.38
PGSC0003DMT400037865	Potato	cytosol	38.68	40.32
Bra017609.1-P	Field mustard	nucleus	44.09	39.13
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	33.45	32.78
HORVU4Hr1G063790.23	Barley	vacuole	30.57	31.87
CDX72434	Canola	cytosol, vacuole	44.76	30.22
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	25.51	29.04
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	26.01	28.1
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	26.18	27.53
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	25.51	26.63
GSMUA_Achr1P12520_001	Banana	mitochondrion	40.71	26.31
GSMUA_Achr1P12510_001	Banana	cytosol	39.53	24.43
HORVU3Hr1G007460.1	Barley	cytosol	25.34	22.26
Solyc01g106980.1.1	Tomato	cytosol	40.71	21.83
HORVU5Hr1G106260.1	Barley	cytosol	13.01	21.33
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	25.0	21.23
HORVU4Hr1G003220.3	Barley	cytosol	25.34	20.33
HORVU2Hr1G021350.12	Barley	mitochondrion	26.35	14.14

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A287RBG7	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU5Hr1G056740	EnsemblPlants:HORVU5Hr1G056740.1	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF8	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000B487D40	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:444210090..444212506

Molecular Weight (calculated)

65473.5 Da

IEP (calculated)

7.909

GRAVY (calculated)

-0.219

Length

592 amino acids

Sequence
(BLAST)

001: WEGMTMRNVV EKLVLSLLCI SLLQGCIVES VEYDHTASIE CLPDPMKPLY KGGIIQNGEF NNGLMGWSTY RNVKAGIRKS TSGNKFAMVQ GASSSLSGTG
101: DAAASPSHSV YQKIQMKGDT HYSLSAWLQV SAGTAHVRAV VKAPNGENIT AGAIDAQCGC WSMLKGGMTA RAHHSGQGEV FFESDAPVNI WVDSVSLQPF
201: SFEEWDAHTR RSASKARRST VKIVARGPDG QPMANANVSI QLLRAGFPFG NAMTKEILGN PAYEKWFFSR FTVATMENEM KWYGTEWVQN QEDYRTPDAM
301: LAMAQKYGVK VRGHNVFWDD QSSQIKWVMA MNLDQLKAAM QKRLKSVVSR YAGKLVHWDV VNENVHFNFF ETKLGPNASP MIYQQVGQID HTAVLFMNEF
401: NVLSQPMDPN INPAKYIAKM KLIQGYPGNA GLKLGIGLES HFSTPNIPYV RSTLDTLAQL KLPMWMTEVD VVKGPNQVKD LEQVLREGYA HPGVQGIVMW
501: AAWHPYGCYV MCLTDNNFKN LPVGDLVDKL IAEWKTHKTS AATDANGMVE LDLVHGDYKL TVNHPSHTTA VSHTMTVDAA SAASQHIITV KV

Best Arabidopsis Sequence Match ( AT2G14690.1 )
(BLAST)

001: MKRFNYGFFH LVLFLISLLL LGSGICMDPF SYDQSLKSEC LMEPPQTTAN TGGEGVKELK INENGGIRNV VEGVDLREGN IYITSAWVKL RNESQRKVGM
101: TFSEKNGRNV FGGEVMAKRG CWSLLKGGIT ADFSGPIDIF FESDGLAGLE ISVQNVRMQR FHKTQWRLQQ DQVIEKIRKN KVRFQMSFKN KSALEGSVIS
201: IEQIKPSFLL GCAMNYRILE SDSYREWFVS RFRLTSFTNE MKWYATEAVR GQENYKIADS MMQLAEENAI LVKGHTVLWD DKYWQPNWVK TITDPEDLKN
301: VTLNRMNSVM KRYKGRLIGW DVMNENVHFN YFENMLGGNA SAIVYSLASK LDPDIPLFLN EFNTVEYDKD RVVSPVNVVK KMQEIVSFPG NNNIKGGIGA
401: QGHFAPVQPN LAYMRYALDT LGSLSFPVWL TEVDMFKCPD QVKYMEDILR EAYSHPAVKA IILYGGPEVS GFDKLTLADK DFKNTQAGDL IDKLLQEWKQ
501: EPVEIPIQHH EHNDEEGGRI IGFSPEISLL HGHYRVTVTN PSMKNLSTRF SVEVTKESGH LQEVQLVIDA

Arabidopsis Description

1,4-beta-xylan endohydrolase [Source:UniProtKB/TrEMBL;Acc:Q680B7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.