Factsheet for HORVU1Hr1G023120.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	89.22	89.37
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	88.87	89.02
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	88.35	88.5
HORVU2Hr1G113150.1	Barley	cytosol	71.3	76.49
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	63.48	62.5
HORVU5Hr1G056740.1	Barley	vacuole	61.91	60.14
Os10t0351600-00	Rice	cytosol	57.04	55.88
HORVU4Hr1G070260.12	Barley	vacuole	52.17	49.1
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	47.13	47.63
KRH29254	Soybean	cytosol	45.74	46.47
AT4G33830.1	Thale cress	vacuole	46.43	46.35
CDY28323	Canola	vacuole	44.7	46.14
Bra034585.1-P	Field mustard	vacuole	45.74	45.9
CDY69164	Canola	vacuole	45.74	45.9
AT4G33840.1	Thale cress	vacuole	45.91	45.83
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	45.57	45.72
VIT_03s0091g00880.t01	Wine grape	vacuole	46.61	45.04
CDY48434	Canola	vacuole	44.87	45.03
Bra034584.1-P	Field mustard	vacuole	44.7	44.85
AT4G33860.1	Thale cress	plasma membrane, vacuole	44.52	44.44
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	42.43	44.28
VIT_03s0091g00900.t01	Wine grape	cytosol	42.43	43.81
KRH29253	Soybean	extracellular, vacuole	42.61	43.29
CDY49378	Canola	plasma membrane, vacuole	42.43	42.66
VIT_03s0091g00950.t01	Wine grape	cytosol	40.7	42.39
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	42.26	42.33
CDY48433	Canola	vacuole	42.43	42.14
CDY28325	Canola	vacuole	42.09	41.8
Solyc01g106990.1.1	Tomato	vacuole	41.04	40.9
Solyc05g051260.2.1	Tomato	golgi, vacuole	40.52	40.38
PGSC0003DMT400037865	Potato	cytosol	39.65	40.14
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	40.0	39.32
Bra017609.1-P	Field mustard	nucleus	44.0	37.93
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	35.48	33.77
HORVU4Hr1G063790.23	Barley	vacuole	30.61	30.99
CDX72434	Canola	cytosol, vacuole	44.87	29.42
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	24.7	27.31
GSMUA_Achr1P12520_001	Banana	mitochondrion	42.96	26.97
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	25.39	26.64
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	25.39	25.93
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	25.39	25.75
GSMUA_Achr1P12510_001	Banana	cytosol	41.57	24.95
HORVU3Hr1G007460.1	Barley	cytosol	26.61	22.7
HORVU4Hr1G003220.3	Barley	cytosol	27.65	21.54
Solyc01g106980.1.1	Tomato	cytosol	40.35	21.01
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	24.87	20.52
HORVU5Hr1G106260.1	Barley	cytosol	12.52	19.94
HORVU2Hr1G021350.12	Barley	mitochondrion	27.13	14.14

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU1Hr1G023120	EnsemblPlants:HORVU1Hr1G023120.1	InterPro:IPR001000
InterPro:IPR008979	UniProt:M0YQU2	PFAM:PF00331	PFAM:PF02018	PFscan:PS51760	PANTHER:PTHR31490
PANTHER:PTHR31490:SF8	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000295BC65
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:100915616..100918121

Molecular Weight (calculated)

63618.9 Da

IEP (calculated)

7.670

GRAVY (calculated)

-0.177

Length

575 amino acids

Sequence
(BLAST)

001: MITMGKLLTF LLCILLFEGW MVQSVPYDYT ASIKCLSSPM GALYKGGIIE NSEFDGGLTG WSVPWGVTAN VSSSPSGNNF ASASNNGQPS RSVYQKIQME
101: TNHHYSLSAW LQVSSGTAVV RAVFKDPSGA FIAGGATVAR SGCWSMLKGG MTASSSGPAE LFFEADGTVD IWVDSVSLQP FSFAEWEEHR RLSAGKARRS
201: AVKVVARAAD GAPLPNANLR VQLLRPGFLF GNAMTKEILD IPAYEQWFTS RFTVASFENE MKWYSTEWRK NREDYGVPDA MLRLAQKHGI AVRGHNVLWD
301: TNDTQLSWVK PLGVPQLKAA MRKRISSVVS RYAGKVIAWD VMNENLHGSF FESRLGPNAS ADVYRRVARI DRTATLFMNE YGTLEQPADV AAMSSKYVAK
401: LRQIRSYPGN RRLKLAVGLE SHFGTPNIPY MRATLDMLAQ LKIPIWLTEV DVSPKAGPYV PDYLEEVLRE GYGHPKVEGM VMWAAWHAQG CWAMCLMDNN
501: FNNLPAGDRV DKLIAEWRAH PEGATMDANG VTELDLVHGE YNFTVTHPSF DKPTVRTLTV DASSSAVEHT IDIKV

Best Arabidopsis Sequence Match ( AT4G33810.1 )
(BLAST)

001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.