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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G33840.1 TraesCS3A01G099400.1 AT2G01950.1 19000166
AT4G33840.1 TraesCS3B01G115800.1 AT2G01950.1 19000166
AT4G33840.1 TraesCS3D01G099700.1 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G107700.1 Wheat extracellular, vacuole 95.47 95.47
TraesCS1B01G124500.1 Wheat endoplasmic reticulum, extracellular, vacuole 93.9 93.9
HORVU1Hr1G023120.1 Barley extracellular 88.5 88.35
TraesCS5A01G196500.1 Wheat plasma membrane, vacuole 62.72 61.33
TraesCS5A01G196600.1 Wheat plasma membrane, vacuole 62.72 61.33
TraesCS2A01G584800.1 Wheat plastid, vacuole 63.24 59.61
Os10t0351600-00 Rice cytosol 57.84 56.56
TraesCS4A01G045500.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.22 51.22
TraesCS4A01G045800.1 Wheat vacuole 51.57 50.77
GSMUA_Achr1P12500_001 Banana extracellular, vacuole 47.56 47.98
AT4G33830.1 Thale cress vacuole 46.34 46.18
KRH29254 Soybean cytosol 45.3 45.94
AT4G33840.1 Thale cress vacuole 45.82 45.66
CDY28323 Canola vacuole 44.25 45.6
CDY69164 Canola vacuole 44.95 45.03
Bra034585.1-P Field mustard vacuole 44.95 45.03
CDY48434 Canola vacuole 44.77 44.85
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 44.77 44.85
Bra034584.1-P Field mustard vacuole 44.43 44.5
VIT_03s0091g00880.t01 Wine grape vacuole 45.99 44.37
AT4G33860.1 Thale cress plasma membrane, vacuole 44.43 44.27
VIT_03s0091g00900.t01 Wine grape cytosol 42.51 43.81
VIT_03s0091g00890.t01 Wine grape extracellular, vacuole 41.99 43.74
Bra034586.1-P Field mustard endoplasmic reticulum, vacuole 42.86 42.86
CDY48433 Canola vacuole 43.03 42.66
KRH29253 Soybean extracellular, vacuole 41.99 42.58
CDY49378 Canola plasma membrane, vacuole 42.33 42.48
CDY28325 Canola vacuole 42.51 42.14
VIT_03s0091g00950.t01 Wine grape cytosol 40.24 41.85
Solyc01g106990.1.1 Tomato vacuole 40.59 40.38
Solyc05g051260.2.1 Tomato golgi, vacuole 39.9 39.69
PGSC0003DMT400037865 Potato cytosol 39.02 39.44
Solyc01g107000.1.1 Tomato endoplasmic reticulum 40.07 39.32
Bra017609.1-P Field mustard nucleus 43.73 37.63
TraesCS2A01G061600.1 Wheat extracellular, plasma membrane, vacuole 35.89 37.05
TraesCS4A01G071100.2 Wheat vacuole 34.49 35.29
CDX72434 Canola cytosol, vacuole 44.43 29.08
TraesCS5A01G441700.1 Wheat cytosol 26.31 27.61
GSMUA_Achr1P12520_001 Banana mitochondrion 43.73 27.4
TraesCS5A01G441600.1 Wheat cytosol 25.78 26.96
TraesCS5A01G441400.1 Wheat cytosol 24.91 25.81
TraesCS3A01G038200.1 Wheat cytosol 25.44 25.7
GSMUA_Achr1P12510_001 Banana cytosol 42.86 25.68
TraesCS3A01G038000.1 Wheat cytosol 23.87 22.24
TraesCS4A01G292300.1 Wheat cytosol 26.66 20.76
Solyc01g106980.1.1 Tomato cytosol 39.72 20.65
TraesCS2A01G122200.1 Wheat mitochondrion 25.26 13.18
Protein Annotations
Gene3D:2.60.120.260Gene3D:3.20.20.80MapMan:35.1InterPro:GH10GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979PFAM:PF00331PFscan:PS51760PANTHER:PTHR31490
PANTHER:PTHR31490:SF8SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS1A01G107100
EnsemblPlants:TraesCS1A01G107100.1:::::
Description
No Description!
Coordinates
chr1A:-:104920090..104922246
Molecular Weight (calculated)
63505.5 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.178
Length
574 amino acids
Sequence
(BLAST)
001: MGKLLAFLLC ISLFEGWMVQ SVPYDYTASI KCLSSPMRSL YKGGIIENSE FNSGLTGWSV PWGVTANVSS SPSGNNFALA SASNNGQPSR SVYQKIQMET
101: AHHYSLSAWL QVSSGTAVVR SVFKDPNGAF IAGGATVARS GCWSMLKGGM TAFASGPGEL FFEADGRVDI WVDSVSLQPF SFPEWDEQRR LSAGKTRRSA
201: VKVVARGADG VPLPNANLSV KLLRPGFPFG NAMTKEILDI PAYEQWFASR FTVASFENEM KWYSTEWMEN HEDYTVADAM LRLAEKHGIA VRGHNVLWDT
301: NDTQVSWVKP LDAQRLKAAM QKRISSVVSR YAGKVIAWDV VNENLHGHFF ESRLGRNASS EVYHRVARID RTARLFMNEF GTLEEPLDAA AMSSKYVAKL
401: QQIRSYPGNR GIKLAVGLES HFGTPNIPYM RATLDMLAQL RVPIWLTEVD VNRNAGPYVP IYLEEVLREG YGHPNVEGMV MWAAWHAQGC WAMCLTDNNF
501: KNLPAGDRVD KLIAEWRTHP EGATMDANGV TELDLVHGEY NFTVTHPSLG SPAVRTLTVD ASSAAVEHTI DIKV
Best Arabidopsis Sequence Match ( AT4G33810.1 )
(BLAST)
001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.