Factsheet for Bra034585.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G33840.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69164	Canola	vacuole	98.43	98.43
Bra034584.1-P	Field mustard	vacuole	86.74	86.74
AT4G33840.1	Thale cress	vacuole	79.93	79.51
AT4G33830.1	Thale cress	vacuole	77.84	77.43
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	72.43	72.3
Bra017609.1-P	Field mustard	nucleus	76.96	66.12
KRH29254	Soybean	cytosol	55.15	55.83
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	53.4	55.54
VIT_03s0091g00900.t01	Wine grape	cytosol	53.23	54.76
VIT_03s0091g00880.t01	Wine grape	vacuole	56.72	54.62
VIT_03s0091g00950.t01	Wine grape	cytosol	50.61	52.54
KRH29253	Soybean	extracellular, vacuole	50.26	50.88
Zm00001d028103_P001	Maize	extracellular, vacuole	51.31	50.69
Os03t0201500-01	Rice	vacuole	50.26	50.17
EER92683	Sorghum	vacuole	51.13	50.17
KXG39936	Sorghum	extracellular, vacuole	50.09	49.74
Zm00001d048151_P001	Maize	vacuole	50.26	49.57
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.21	49.47
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	49.04	49.38
TraesCS4B01G259100.1	Wheat	vacuole	48.87	49.12
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.04	48.95
Os03t0201901-00	Rice	cytosol	48.69	48.95
TraesCS4D01G259100.1	Wheat	vacuole	49.04	48.2
TraesCS4B01G259400.1	Wheat	vacuole	48.69	47.86
TraesCS4A01G045800.1	Wheat	vacuole	48.52	47.68
Os10t0351700-01	Rice	plasma membrane	47.64	46.99
Solyc01g106990.1.1	Tomato	vacuole	47.12	46.79
HORVU4Hr1G070260.12	Barley	vacuole	49.21	46.15
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	46.95	45.83
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	46.95	45.83
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	46.95	45.83
HORVU5Hr1G056740.1	Barley	vacuole	47.29	45.78
HORVU1Hr1G023120.1	Barley	extracellular	45.9	45.74
HORVU2Hr1G113150.1	Barley	cytosol	42.76	45.71
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.72	45.64
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	47.82	45.51
Zm00001d030468_P001	Maize	cytosol	46.6	45.33
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	45.38	45.3
TraesCSU01G021800.1	Wheat	extracellular, vacuole	45.9	44.96
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	45.03	44.95
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	45.55	44.69
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	45.55	44.62
TraesCS2B01G537100.1	Wheat	vacuole	43.8	43.73
PGSC0003DMT400037865	Potato	cytosol	43.28	43.66
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	49.74	43.31
TraesCS2D01G510500.1	Wheat	vacuole	43.28	43.21
Solyc05g051260.2.1	Tomato	golgi, vacuole	43.46	43.15
TraesCS2A01G584800.1	Wheat	plastid, vacuole	45.72	43.02
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	42.06	42.13
Os03t0201800-01	Rice	extracellular	39.27	38.66
Bra017610.1-P	Field mustard	extracellular, vacuole	30.89	38.65
Os10t0351600-00	Rice	cytosol	39.44	38.5
Bra036392.1-P	Field mustard	cytosol	34.21	37.4
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	36.47	37.06
GSMUA_Achr1P12520_001	Banana	mitochondrion	46.25	28.93
GSMUA_Achr1P12510_001	Banana	cytosol	43.63	26.1
Solyc01g106980.1.1	Tomato	cytosol	45.38	23.55
Bra027867.1-P	Field mustard	cytosol	26.35	16.4
Bra039768.1-P	Field mustard	cytosol	24.96	14.53
Bra031698.1-P	Field mustard	cytosol	26.7	14.47

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	EnsemblPlantsGene:Bra034585	EnsemblPlants:Bra034585.1	EnsemblPlants:Bra034585.1-P
InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF
InterPro:IPR001000	InterPro:IPR008979	UniProt:M4F0J0	PFAM:PF00331	PFAM:PF02018	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF2	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0002546598	SEG:seg	:	:	:	:

Description

AT4G33840 (E=2e-271) | glycosyl hydrolase family 10 protein

Coordinates

chrA08:+:12692203..12694838

Molecular Weight (calculated)

63689.3 Da

IEP (calculated)

6.702

GRAVY (calculated)

-0.287

Length

573 amino acids

Sequence
(BLAST)

001: MKLLLLLLLA FFCLSLSRCE EKYVPYDYSA TIECLGNPNK PQYNGGIIVN PDLQNGSQGW SQLGNAKVDF TEFGGNKFVI ARGRNRSYDS VSQKVYLEKG
101: LLYTFSAWLQ VSQGNAPVRA VFKKNGEYKL AGSVIAESKC WSMLKGGLTV DESGPADLLF ESEDTSAEIW VDSVSLQPFT QEEWNSHHEQ SINMKRKGAV
201: KIRAVNSAGE PVPNATISIL QNKLGFPFGC AVESNILGNQ AYQDWFTKRF TVTTFGNEMK WYSTEVVRGK EDYSTADAMV KLFQQHGIAI RGHNIIWDNP
301: IYQPSWVKAL SVSDLYNAVK RRVFSVVTRY KGQLAGWDVV NENLHFSFLE SKFGPKASYN VFAQAHALDP TTTVFMNEYN TLEQPGDPVA TPARYLQKLR
401: ELQSIHVAGN IPLGIGLQSH FSTPNIPYMR SALDTLAATG LPNWLAEVDV AAPPNVQANY FEQILREGHA HPQVKGMVTW AGYNPKGCYR MCLTDGNFRN
501: LPTGDVVDKL LREWGGLSGQ TTGLTDADGF FEASLFHGDY NLDISHPLTN STASHSFKLT SEDSNPSPSV FRV

Best Arabidopsis Sequence Match ( AT4G33840.1 )
(BLAST)

001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV

Arabidopsis Description

At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.