Factsheet for Bra031698.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G10050.3	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	85.53	82.56
CDY53833	Canola	endoplasmic reticulum, extracellular	98.77	71.8
Bra027867.1-P	Field mustard	cytosol	51.84	59.5
EER96324	Sorghum	mitochondrion	51.47	49.54
Zm00001d019586_P008	Maize	mitochondrion	51.37	49.41
TraesCS2A01G122200.1	Wheat	mitochondrion	51.37	49.36
TraesCS2D01G124900.1	Wheat	mitochondrion	51.18	49.18
Os07t0456700-01	Rice	plasma membrane	51.18	49.14
HORVU2Hr1G021350.12	Barley	mitochondrion	50.9	48.78
TraesCS2B01G144300.3	Wheat	mitochondrion	51.09	47.79
Bra039768.1-P	Field mustard	cytosol	42.57	45.73
GSMUA_Achr1P24570_001	Banana	cytosol	50.05	44.64
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	16.37	30.67
Bra017610.1-P	Field mustard	extracellular, vacuole	11.64	26.86
Bra034585.1-P	Field mustard	vacuole	14.47	26.7
Bra034584.1-P	Field mustard	vacuole	14.38	26.53
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	14.38	26.48
Bra036392.1-P	Field mustard	cytosol	12.2	24.62
Bra017609.1-P	Field mustard	nucleus	14.0	22.19

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra031698	EnsemblPlants:Bra031698.1	EnsemblPlants:Bra031698.1-P
InterPro:CenC_carb-bd	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	UniProt:M4ESC0	PFAM:PF00331	PFAM:PF02018
PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF15	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0002543217	SEG:seg	:	:

Description

AT1G10050 (E=0.0) | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein

Coordinates

chrA09:-:35186301..35190891

Molecular Weight (calculated)

118149.0 Da

IEP (calculated)

5.437

GRAVY (calculated)

-0.338

Length

1057 amino acids

Sequence
(BLAST)

0001: MAHSNIVHNG DFSDGLEPWH PNACQAFVVS SDSSSSDSGY AVVTNRKETW QGLEQDITPQ VSPGVTYNVS ACVGVSGPFH ESSQVLATVR LEHDDSPTEY
0101: IFVGKTYASR DKWVDLEGTF SISNMPDRVV IYLEGPPPGK DLLIRSVTVK ESTSCDFQET EENKAAFSVY PPPLNIITNH DFSDGLCSWN SNSCDSFVVG
0201: SNECNSESYA VVNNRSETWQ GLEQDITDRV SPGCSYKVSA SVSVWGPVQR SAQVLATLKL EHQGSPTEFK LIGKTYVSND VWKTLEGTFA LSGRPDRVVF
0301: FLEGPPPGVD LLIKSVTIHC ESDNQFERSR DFSSAPEADH HHIFLNSSFS DGLNHWSGRG CNLMLHESLA DGRILPHSGT CFASATERTH KWSGIEQDIT
0401: ERVQRKLIYE ASSVVRLSHS HHTVQATLYV QYLDQREEYI GISSVEANHD DWVKLKGKFL LNGSPARAVV YIEGPPPGID VFVDHFEVKP AEKPPPSRRP
0501: YIESHVFGMN IVSNSHLTDG TIEGWFPLGD CHLRVGEGSP QILPPLAKHS LRTTHDYLSG RYVLATNRSG TWMGPAQMIT DKVKLFLTYQ VSAWVKVGSG
0601: GLTCPQDVNI ALSVDGKWVN GGKVEVKDGD WHEVVGSFRI EKQAREVMLH VQGPSPGVDL MVAGLQIFAV DHKARLSYLK GQADMVRKRN VRLKVTGLDP
0701: NELSGATVKI RQTSNSFPLG SCISRSNIDN EDFVEFFLNN FKWAVFGNEL KWSWTEPEQG NLNYRNADEM LGFCETYNVQ TRGHCIFWEV ESAIQPWVQQ
0801: LSEPTLEAAV ENRLTDLLTR YNGKFRHYDV NNEMLHGSFY RDKLGFDARA KMFRTAHELD PLARLFLNEY HIEDGFDSRS SPEKYIKLVH KLQKKGAPVG
0901: GIGIQGHITS PVGHIVRNAL DKLSTLGLPI WFTELDVSSV NEHVRGDDLE VMLWEAFAHP AVEGVMLWGF WELFMSREDA HLVDADGEVN EAGRRFLEIK
1001: REWLTFVEGV VEDGEGGFEF RGYHGSYVVE VVTCEGKYVK NFVVEKGNSP VDVIIEL

Best Arabidopsis Sequence Match ( AT1G10050.3 )
(BLAST)

0001: MSVGFLFLQL ITFLCPLASL FSSFPFKVQA KLMADLNIVM NGDFFAGIEP WYPNGCEAFV VSSDPFSSEV MSADSSSGGY VVVTNRKETW QGLEQDITTR
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.