Factsheet for Bra010733.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90288	Canola	endoplasmic reticulum, extracellular	98.05	98.05
AT4G38650.1	Thale cress	vacuole	84.04	84.34
AT4G38300.1	Thale cress	mitochondrion	40.96	83.39
KRH51408	Soybean	extracellular	62.77	64.25
KRH60710	Soybean	extracellular	60.99	61.76
PGSC0003DMT400021703	Potato	mitochondrion	40.96	60.95
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	35.64	59.64
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	58.87	58.25
PGSC0003DMT400015813	Potato	cytosol	51.42	57.31
Os05t0304900-01	Rice	extracellular, vacuole	49.29	56.28
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	42.55	55.3
VIT_03s0038g02180.t01	Wine grape	cytosol	60.82	54.88
Solyc01g111340.2.1	Tomato	extracellular	52.84	54.48
Solyc11g040330.1.1	Tomato	extracellular	52.84	54.28
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	52.48	53.24
EES10525	Sorghum	plasma membrane, vacuole	53.55	52.61
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	53.37	52.35
TraesCS2B01G075000.1	Wheat	plastid	52.66	51.56
Solyc10g055370.1.1	Tomato	vacuole	50.71	50.98
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	53.01	49.5
Solyc10g055340.1.1	Tomato	cytosol	18.44	47.27
PGSC0003DMT400085040	Potato	cytosol	15.96	43.48
Bra034585.1-P	Field mustard	vacuole	37.06	36.47
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	37.06	36.41
Bra034584.1-P	Field mustard	vacuole	36.52	35.95
Bra036392.1-P	Field mustard	cytosol	30.85	33.21
Bra017610.1-P	Field mustard	extracellular, vacuole	26.6	32.75
Bra017609.1-P	Field mustard	nucleus	36.35	30.73
Bra027867.1-P	Field mustard	cytosol	29.61	18.13
TraesCS1D01G329900.1	Wheat	peroxisome	2.84	17.98
Bra039768.1-P	Field mustard	cytosol	29.61	16.97
Bra031698.1-P	Field mustard	cytosol	30.67	16.37

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	EnsemblPlantsGene:Bra010733	EnsemblPlants:Bra010733.1	EnsemblPlants:Bra010733.1-P
InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	UniProt:M4D2N0	PFAM:PF00331	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002546B53	:	:	:	:

Description

AT4G38650 (E=2e-280) | glycosyl hydrolase family 10 protein

Coordinates

chrA08:-:16168026..16170595

Molecular Weight (calculated)

63507.0 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.276

Length

564 amino acids

Sequence
(BLAST)

001: MKHSSIIGFI FCAIYSLLAA FILVSSSNDG PFYDSTAYTE CRAEPEKPLY NGGMLKGEEA SGSGRDTLRS VGASYTPAYI LHNLTQNTIY CFSIWVKIEA
101: GSASTARVRA KLRSDNATLN CVGSVSAKQG CWSFLKGGFL LDSPSQLSIL FFETTNDDGK TQLEVASASL QPFTQDQWKN NQDYFINTAR KRAVTIHVAG
201: ENGESAEGAV VNVEQIAKDF PIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP HQGKLNYTFA DQMMSFVRAN RIIARGHNIF WEDPKYTPDW
301: VRNLTGEDLR SAVNQRITSL MTRYRGEFVH WDVSNEMLHF DFYESRLGKN ASYELFAAAR ELDSLATLFL NDFNVVETCS DERSTVDEYI ARVKELERYD
401: GGGMRMDGVG LEGHFTRPNV ALMRANLDKL ATLELPVWLT EIDISSTLDH RTQALYLEQV LREGFSHPSV NGIILWTALH PNGCYQMCLT DDKFINLPAG
501: DVVDKKLLEW TTGEVKAKTD DRGTFSFLGF LGEYRVSIIY EGKTVNSSFS LSRDPETKHV RLRI

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.