Factsheet for Solyc10g055340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	66.36	33.64
Solyc10g055370.1.1	Tomato	vacuole	66.82	26.2
Solyc11g040330.1.1	Tomato	extracellular	50.91	20.4
Solyc04g077200.1.1	Tomato	cytosol	9.55	20.39
CDY12095	Canola	vacuole	44.09	19.92
KRH51408	Soybean	extracellular	47.73	19.06
Solyc01g111340.2.1	Tomato	extracellular	46.82	18.83
Os05t0304900-01	Rice	extracellular, vacuole	42.27	18.83
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	47.27	18.44
CDX90288	Canola	endoplasmic reticulum, extracellular	47.27	18.44
AT4G38650.1	Thale cress	vacuole	46.36	18.15
KRH60710	Soybean	extracellular	45.91	18.13
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	45.0	17.37
VIT_03s0038g02180.t01	Wine grape	cytosol	49.09	17.28
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	42.27	16.73
EES10525	Sorghum	plasma membrane, vacuole	43.18	16.55
TraesCS2B01G075000.1	Wheat	plastid	42.27	16.15
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	40.91	15.65
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	42.27	15.4
AT4G38300.1	Thale cress	mitochondrion	18.18	14.44
Solyc11g043160.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	35.91	13.62
TraesCS1D01G329900.1	Wheat	peroxisome	5.45	13.48
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	34.55	12.99
Solyc01g105500.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	33.18	12.72
Solyc01g106990.1.1	Tomato	vacuole	33.18	12.65
Solyc05g051260.2.1	Tomato	golgi, vacuole	32.73	12.48
Solyc01g106980.1.1	Tomato	cytosol	34.09	6.79
Solyc12g088210.1.1	Tomato	mitochondrion	27.27	6.51
Solyc04g077190.2.1	Tomato	extracellular	27.73	5.33

Protein Annotations

EnsemblPlants:Solyc10g055340.1.1	EnsemblPlantsGene:Solyc10g055340.1	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:GH10	InterPro:Glycoside_hydrolase_SF
InterPro:IPR001000	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	PFAM:PF00331	SUPFAM:SSF51445	UniParc:UPI0002769497
UniProt:K4D1C6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr10:-:56583130..56584262

Molecular Weight (calculated)

26373.0 Da

IEP (calculated)

10.255

GRAVY (calculated)

-0.652

Length

220 amino acids

Sequence
(BLAST)

001: MEISGYSLQP FTEDEWRLNQ LERINTLQKV MNRRIESVVS KYRNEFFHWD INNEILHYEK KLGPKANLRM FKKVQREDPQ VTLFLNEFNI IENCDRNINV
101: AMYIEKFKQL KKGAIKVKNK LQILREAFSH PSVNRIMLWS ALGKGGCYRM CLTDYKFNNL PTGDLIDQLL LREWKTGTQR GKTNEFGYYN FRGFLREYEL
201: RTKISHKNIK VAKISHYFSK

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.