CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51408	Soybean	extracellular	92.64	93.65
AT4G38300.1	Thale cress	mitochondrion	34.83	70.04
PGSC0003DMT400015813	Potato	cytosol	57.63	63.44
CDX90288	Canola	endoplasmic reticulum, extracellular	61.94	61.17
Solyc01g111340.2.1	Tomato	extracellular	59.96	61.06
AT4G38650.1	Thale cress	vacuole	61.58	61.03
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	61.76	60.99
VIT_03s0038g02180.t01	Wine grape	cytosol	68.22	60.8
CDY12095	Canola	vacuole	51.53	58.93
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	35.37	58.46
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	59.6	58.25
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	43.81	56.22
Os05t0304900-01	Rice	extracellular, vacuole	49.73	56.07
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	54.76	54.86
EES10525	Sorghum	plasma membrane, vacuole	54.76	53.14
TraesCS2B01G075000.1	Wheat	plastid	54.94	53.12
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	54.04	52.35
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	54.76	50.5
Solyc10g055370.1.1	Tomato	vacuole	49.73	49.38
PGSC0003DMT400085040	Potato	cytosol	17.95	48.31
KRG91114	Soybean	nucleus	7.18	47.62
Solyc10g055340.1.1	Tomato	cytosol	18.13	45.91
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	37.16	35.69
KRH35663	Soybean	plasma membrane, vacuole	36.98	35.46
KRH29254	Soybean	cytosol	35.91	35.34
KRG91115	Soybean	cytoskeleton, cytosol, plastid	11.31	35.2
KRH35662	Soybean	cytosol, nucleus, vacuole	26.03	35.02
KRH29253	Soybean	extracellular, vacuole	33.21	32.69
TraesCS1D01G329900.1	Wheat	peroxisome	3.77	23.6
KRH61477	Soybean	cytosol	31.24	23.48
KRH52165	Soybean	cytosol, nucleus	31.24	23.45
KRH15483	Soybean	mitochondrion	32.67	19.57
KRH05535	Soybean	mitochondrion	32.32	19.33

Protein Annotations

EntrezGene:100793558	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	EMBL:ACUP02002137	InterPro:GH10
EnsemblPlantsGene:GLYMA_04G004600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	UniProt:I1JSF0	InterPro:IPR001000
InterPro:IPR008979	EnsemblPlants:KRH60710	ProteinID:KRH60710	ProteinID:KRH60710.1	PFAM:PF00331	PRINTS:PR00134
PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	MetaCyc:PWY-6784	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002964315	:	:

Description

hypothetical protein

Coordinates

chr4:+:392963..396685

Molecular Weight (calculated)

63213.7 Da

IEP (calculated)

5.896

GRAVY (calculated)

-0.258

Length

557 amino acids

Sequence
(BLAST)

001: MQDIPFCSLI VFFFLIGASL VSPLYDGPLY DSTAYAECKE KPEEPLYGGG LFNTRRGVEG TIDSSISNVA NNSYVPSLVL YNLTQGTIYS FSAWVRVKGS
101: SSAMVRTTLE TEKETHDCIG TVSAKHECWS FLKGGFVLNW SSNLSMIFFQ NADGKDINID VASPSLQPFT KQQWRINQQY KINTQRKRAV TIHVSDSNGR
201: RFQGASICIE QISKDFPFGS AIAKTILGNL PYQNWFVKRF NAAVFENELK WYATEPDEGK VNYTISDQML QFVRTNNIIA RGHNIFWENP KYTPPWVLNL
301: TGTKLQSAVN SRIHSLMSQY KDEFIHWDVS NEMLHFNFYE ERLGPDATLH FFETAHESDP LATLFMNDFN VVETCSDVKS TVDAYISRVR ELQRNGIFMD
401: GIGLEGHFTI PNPPLIRAIL DKLATLGLPI WLTEVDISKT LDRDAQANYL EEVLREGFSH PSVNGIMLWT AFHPNGCYQM CLTDNNFKNL PAGDVVDKLV
501: EEWQISRVEG VTDVHGSYSF YGFLGEYRIS VKYGNKTTKS TFSLSRGDET RHFTITI

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.