Factsheet for Solyc01g111340.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015813	Potato	cytosol	87.75	94.86
KRH51408	Soybean	extracellular	62.89	62.43
AT4G38300.1	Thale cress	mitochondrion	31.08	61.37
KRH60710	Soybean	extracellular	61.06	59.96
PGSC0003DMT400085040	Potato	cytosol	22.67	59.9
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	58.14	55.79
Solyc11g040330.1.1	Tomato	extracellular	55.94	55.74
VIT_03s0038g02180.t01	Wine grape	cytosol	63.44	55.52
AT4G38650.1	Thale cress	vacuole	55.03	53.56
CDX90288	Canola	endoplasmic reticulum, extracellular	54.84	53.19
Os05t0304900-01	Rice	extracellular, vacuole	47.9	53.04
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	54.48	52.84
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	52.65	51.8
CDY12095	Canola	vacuole	45.7	51.33
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	53.93	51.3
EES10525	Sorghum	plasma membrane, vacuole	53.02	50.52
TraesCS2B01G075000.1	Wheat	plastid	52.65	50.0
Solyc10g055370.1.1	Tomato	vacuole	50.46	49.2
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	52.29	47.35
Solyc10g055340.1.1	Tomato	cytosol	18.83	46.82
Solyc01g105500.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	36.01	34.32
Solyc04g077200.1.1	Tomato	cytosol	6.4	33.98
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	36.2	33.85
Solyc01g106990.1.1	Tomato	vacuole	34.73	32.93
Solyc05g051260.2.1	Tomato	golgi, vacuole	33.46	31.72
Solyc11g043160.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	33.27	31.38
TraesCS1D01G329900.1	Wheat	peroxisome	4.39	26.97
Solyc12g088210.1.1	Tomato	mitochondrion	29.43	17.48
Solyc01g106980.1.1	Tomato	cytosol	34.0	16.85
Solyc04g077190.2.1	Tomato	extracellular	31.08	14.86

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000
UniProt:K4B3Z6	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3
SMART:SM00633	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g111340.2	EnsemblPlants:Solyc01g111340.2.1	TMHMM:TMhelix
UniParc:UPI0002767550	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:97617582..97620359

Molecular Weight (calculated)

62410.1 Da

IEP (calculated)

5.477

GRAVY (calculated)

-0.314

Length

547 amino acids

Sequence
(BLAST)

001: MKCQYLFLLI IGLFLSILPS FASYEEPIYD HSAYTECKSV PEDALYNGGI MKDYRTNENK VIRSETNSYN FVLNNLSGDT IYSWIRILDA DSAVMKASLK
101: TDDGTVKCVG NVIARAGCWS FLKGGFVLDL PSSYGLLYLQ RSDGEKLNIS ISSVSLQPFT YQQWKKNQQD AIDKGRKCTA IIHISDVQGE RVPGASIIIE
201: QLSRDFPFGS AITKTILGNP AYQTWFKERY NAAVFEDELK WYSTENQQGV VNYTIPDQML EFVRKNQIIT RGHNIFWEDP RYIPSWVRNL TGPDLKSAVT
301: SRIQSLMNKY KNEFIHWDVD NEMLHYDFYE QRLGINTSLE FFQTAQQLDP LAKLFMNDYN VVETCYDMNS TVDAYISKLR DLKQGGIFMD GIGLEGHFTV
401: PNPPLIRAVL DKLATLKLPI WLTEVDISKN LDKETQARYL EMVLREGFSH PGVNGIMLWT GLHSNGCYQM CLTDNDFHNL PAGDIVDNLL KEWQTGVVHG
501: ETDEHGSFSF SGFLGEYKIN VKSGNRTTNS TFSLYRGDDT RHLNIHL

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.