Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- plastid 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g055340.1.1 | Tomato | cytosol | 20.39 | 9.55 |
| Solyc12g088210.1.1 | Tomato | mitochondrion | 64.08 | 7.17 |
| Solyc01g111340.2.1 | Tomato | extracellular | 33.98 | 6.4 |
| Solyc04g077190.2.1 | Tomato | extracellular | 69.9 | 6.29 |
| Solyc11g040330.1.1 | Tomato | extracellular | 33.01 | 6.19 |
| Solyc10g055370.1.1 | Tomato | vacuole | 32.04 | 5.88 |
| Solyc01g105500.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 28.16 | 5.05 |
| Solyc11g043160.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 24.27 | 4.31 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 24.27 | 4.27 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 22.33 | 3.99 |
| Solyc01g106990.1.1 | Tomato | vacuole | 17.48 | 3.12 |
| Solyc01g106980.1.1 | Tomato | cytosol | 17.48 | 1.63 |
Protein Annotations
| EnsemblPlants:Solyc04g077200.1.1 | EnsemblPlantsGene:Solyc04g077200.1 | InterPro:Glycoside_hydrolase_SF | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | SUPFAM:SSF51445 |
| UniParc:UPI000276625F | UniProt:K4BUF7 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr4:+:62123003..62123354
Molecular Weight (calculated)
12152.3 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.347
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHLLDIVSW TRCIFVDVSS DNEYVRADDV EVILREAYAH PAVEGIMLWR LWEQFFNKPN SHLVNPKGDL NRRYLALKHE WLSHAHSQID EQSQFSFRGF
101: HGS
101: HGS
001: MEVSRKDNEE PEKQNNNNVA SIIGSDRTNV IVNHDFSSGM HSWHPNCCEA FVVTAESNVS HGVLDPSKCG SYVVVKNRKE TWQGLEQDIT NRVKPCSLYK
101: VSATVAVSGP VHGLVEVMAT LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT IHRESEPELE RVTAEDETIV
201: VNPNFEDGLN NWSGRSCKIV LHDSMADGKI VPESGKVFAS ATERTQNWNG IQQEITGKVQ RKRVYEATAV VRIYGNNVTT ATVQATLWVQ NPNQRDQYIG
301: ISTVQATDKE WIHLKGKFLL NGSASRVVIY IEGPPPGTDI LLNSLTVKHA EKIPPSPPPS IENPAFGVNI LTNSHLSDDT TNGWFSLGNC TLSVAEGSPR
401: ILPPMARDSL GAHERLSGRY ILVTNRTQTW MGPAQMITDK LKLFLTYQIS VWVKVGSGIN SPQNVNVALG IDSQWVNGGQ VEINDDRWHE IGGSFRIEKN
501: PSKALVYVQG PSSGIDLMVA GLQIFPVDRL ARIKHLKRQC DKIRKRDVIL KFAGVDSSKF SGASVRVRQI RNSFPVGTCI SRSNIDNEDF VDFFLKNFNW
601: AVFANELKWY WTEPEQGKLN YQDADDMLNL CSSNNIETRG HCIFWEVQAT VQQWIQNMNQ TDLNNAVQNR LTDLLNRYKG KFKHYDVNNE MLHGSFYQDK
701: LGKDIRVNMF KTAHQLDPSA TLFVNDYHIE DGCDPKSCPE KYTEQILDLQ EKGAPVGGIG IQGHIDSPVG PIVCSALDKL GILGLPIWFT ELDVSSVNEH
801: IRADDLEVMM WEAFGHPAVE GIMLWGFWEL FMSRDNSHLV NAEGDVNEAG KRFLAVKKDW LSHANGHIDQ NGAFPFRGYS GNYAVEVITT SSSKVLKTFG
901: VDKEDSSQVI TVDLQGL
101: VSATVAVSGP VHGLVEVMAT LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT IHRESEPELE RVTAEDETIV
201: VNPNFEDGLN NWSGRSCKIV LHDSMADGKI VPESGKVFAS ATERTQNWNG IQQEITGKVQ RKRVYEATAV VRIYGNNVTT ATVQATLWVQ NPNQRDQYIG
301: ISTVQATDKE WIHLKGKFLL NGSASRVVIY IEGPPPGTDI LLNSLTVKHA EKIPPSPPPS IENPAFGVNI LTNSHLSDDT TNGWFSLGNC TLSVAEGSPR
401: ILPPMARDSL GAHERLSGRY ILVTNRTQTW MGPAQMITDK LKLFLTYQIS VWVKVGSGIN SPQNVNVALG IDSQWVNGGQ VEINDDRWHE IGGSFRIEKN
501: PSKALVYVQG PSSGIDLMVA GLQIFPVDRL ARIKHLKRQC DKIRKRDVIL KFAGVDSSKF SGASVRVRQI RNSFPVGTCI SRSNIDNEDF VDFFLKNFNW
601: AVFANELKWY WTEPEQGKLN YQDADDMLNL CSSNNIETRG HCIFWEVQAT VQQWIQNMNQ TDLNNAVQNR LTDLLNRYKG KFKHYDVNNE MLHGSFYQDK
701: LGKDIRVNMF KTAHQLDPSA TLFVNDYHIE DGCDPKSCPE KYTEQILDLQ EKGAPVGGIG IQGHIDSPVG PIVCSALDKL GILGLPIWFT ELDVSSVNEH
801: IRADDLEVMM WEAFGHPAVE GIMLWGFWEL FMSRDNSHLV NAEGDVNEAG KRFLAVKKDW LSHANGHIDQ NGAFPFRGYS GNYAVEVITT SSSKVLKTFG
901: VDKEDSSQVI TVDLQGL
Arabidopsis Description
RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.