Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024766 | Potato | cytosol | 75.86 | 86.11 |
| Solyc01g105500.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 43.45 | 43.9 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 37.24 | 37.44 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 37.41 | 37.09 |
| Solyc10g055340.1.1 | Tomato | cytosol | 13.62 | 35.91 |
| Solyc01g106990.1.1 | Tomato | vacuole | 35.34 | 35.53 |
| Solyc10g055370.1.1 | Tomato | vacuole | 33.79 | 34.94 |
| Solyc01g111340.2.1 | Tomato | extracellular | 31.38 | 33.27 |
| Solyc11g040330.1.1 | Tomato | extracellular | 30.34 | 32.06 |
| Solyc04g077200.1.1 | Tomato | cytosol | 4.31 | 24.27 |
| Solyc01g106980.1.1 | Tomato | cytosol | 33.97 | 17.84 |
| Solyc12g088210.1.1 | Tomato | mitochondrion | 24.14 | 15.2 |
| Solyc04g077190.2.1 | Tomato | extracellular | 23.62 | 11.98 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | InterPro:CenC_carb-bd | InterPro:GH10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | UniProt:K4D883 |
| PFAM:PF00331 | PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | SMART:SM00633 |
| SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc11g043160.1 | EnsemblPlants:Solyc11g043160.1.1 | UniParc:UPI000276A2B6 |
Description
No Description!
Coordinates
chr11:+:33426529..33430796
Molecular Weight (calculated)
66864.4 Da
IEP (calculated)
8.866
GRAVY (calculated)
-0.322
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIAISCAYG VILCCPLLFS GNGVDGMTYN YNASIECLAE PQHVQYKGGT LINPKFDLGL HGWEGMGGAK IEIRRSFSRN NFMVAYNRNE YNATFSQKIF
101: MEKGYYYTFS AWVRVSEGTE TTVSAAIITK ENSKRVIASG NAYPGCWTML KGGFQPEFPL PTELYFVCYN KTADFWVDNV SLKEFNKTEW HQHQQRAITR
201: VRKRKIVLAI KDKLGKPIHG VKVNIKFTKP YFHIGCGVTD TLLQHKKYQE WFLKKGFTAS VFTNQMKWYW TESRRGIENY TIPDAMFQFF KNNNIAIRGH
301: TVLWDKPKMN QYWLHDMTPK ELLATAIRRI ASIMARYSND IFEWDVVNEN LHFKFYEDKI GAQASGMFYH IAHVIDPNAT LYLNEFNSLE IPGDLYAGPH
401: KYINKWREIR LYPGNENLTI GFGLQAHFGL GKPLMPYIRA VLDLFSETKM PIWLTEMDIP NNANQAVYLE EIMREAFSHP GVEGIIVWAP WKPGINCTSL
501: CLMDDNFNNT AAGDIVDKLM REWRTPEQNG KTNSQGLYRY DGFLGDYNVV LYDPHSLNKV SRQIKITNKD PNKIVIPISI
101: MEKGYYYTFS AWVRVSEGTE TTVSAAIITK ENSKRVIASG NAYPGCWTML KGGFQPEFPL PTELYFVCYN KTADFWVDNV SLKEFNKTEW HQHQQRAITR
201: VRKRKIVLAI KDKLGKPIHG VKVNIKFTKP YFHIGCGVTD TLLQHKKYQE WFLKKGFTAS VFTNQMKWYW TESRRGIENY TIPDAMFQFF KNNNIAIRGH
301: TVLWDKPKMN QYWLHDMTPK ELLATAIRRI ASIMARYSND IFEWDVVNEN LHFKFYEDKI GAQASGMFYH IAHVIDPNAT LYLNEFNSLE IPGDLYAGPH
401: KYINKWREIR LYPGNENLTI GFGLQAHFGL GKPLMPYIRA VLDLFSETKM PIWLTEMDIP NNANQAVYLE EIMREAFSHP GVEGIIVWAP WKPGINCTSL
501: CLMDDNFNNT AAGDIVDKLM REWRTPEQNG KTNSQGLYRY DGFLGDYNVV LYDPHSLNKV SRQIKITNKD PNKIVIPISI
001: MNSIKNGFFL CMIFLLWCHV DSGVSIDPFS HSHSLNTECV MKPPRSSETK GLLQFSRSLE DDSDEEWKID GNGFIREMAQ RIQLHQGNIY SFSAWVKLRE
101: GNDKKVGVVF RTENGRLVHG GEVRANQECW TLLKGGIVPD FSGPVDIFFE SENRGAKISA HNVLLKQFSK EEWKLKQDQL IEKIRKSKVR FEVTYENKTA
201: VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK ITSFTNEMKW YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK
301: DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS FYNLAFKIDP DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN
401: MKGAIGAQGH FGPTQPNLAY IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ YVEDILREAY SHPAVKGIII FGGPEVSGFD KLTLADKDFN NTQTGDVIDK
501: LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH PWIANLSTSF SLEVTKEMDQ DQVIRVVISA
101: GNDKKVGVVF RTENGRLVHG GEVRANQECW TLLKGGIVPD FSGPVDIFFE SENRGAKISA HNVLLKQFSK EEWKLKQDQL IEKIRKSKVR FEVTYENKTA
201: VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK ITSFTNEMKW YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK
301: DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS FYNLAFKIDP DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN
401: MKGAIGAQGH FGPTQPNLAY IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ YVEDILREAY SHPAVKGIII FGGPEVSGFD KLTLADKDFN NTQTGDVIDK
501: LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH PWIANLSTSF SLEVTKEMDQ DQVIRVVISA
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84WT5]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.