Factsheet for Solyc10g055370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	57.04	94.96
Solyc10g055340.1.1	Tomato	cytosol	26.2	66.82
AT4G38300.1	Thale cress	mitochondrion	27.27	55.23
AT4G38650.1	Thale cress	vacuole	51.69	51.6
CDX90288	Canola	endoplasmic reticulum, extracellular	51.34	51.06
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.98	50.71
KRH51408	Soybean	extracellular	49.73	50.64
Solyc01g111340.2.1	Tomato	extracellular	49.2	50.46
Solyc11g040330.1.1	Tomato	extracellular	49.38	50.46
KRH60710	Soybean	extracellular	49.38	49.73
CDY12095	Canola	vacuole	42.96	49.49
Os05t0304900-01	Rice	extracellular, vacuole	42.78	48.58
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	49.02	48.25
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	47.24	47.66
TraesCS2B01G075000.1	Wheat	plastid	47.24	46.01
EES10525	Sorghum	plasma membrane, vacuole	46.35	45.3
VIT_03s0038g02180.t01	Wine grape	cytosol	50.45	45.28
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	46.17	45.04
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	47.24	43.87
Solyc11g043160.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	34.94	33.79
Solyc01g105500.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	33.51	32.75
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	33.87	32.48
Solyc04g077200.1.1	Tomato	cytosol	5.88	32.04
Solyc05g051260.2.1	Tomato	golgi, vacuole	32.62	31.72
Solyc01g106990.1.1	Tomato	vacuole	32.44	31.54
TraesCS1D01G329900.1	Wheat	peroxisome	2.67	16.85
Solyc01g106980.1.1	Tomato	cytosol	31.37	15.94
Solyc12g088210.1.1	Tomato	mitochondrion	25.85	15.74
Solyc04g077190.2.1	Tomato	extracellular	27.45	13.46

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	UniProt:K4D1C9	PFAM:PF00331	PRINTS:PR00134
PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	SMART:SM00633	SUPFAM:SSF51445	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc10g055370.1	EnsemblPlants:Solyc10g055370.1.1	TMHMM:TMhelix	UniParc:UPI000276949A	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:56643920..56646573

Molecular Weight (calculated)

64764.9 Da

IEP (calculated)

9.074

GRAVY (calculated)

-0.294

Length

561 amino acids

Sequence
(BLAST)

001: MLMLMWRRSP LFWIFFLFLF FATSSLAKHH VGNVYDYSAW TECQAEPVAA LYKGGILRNK FPIYQPVKDI NGDMVDSPTL SLENLSQGSI YSFSSWVRVK
101: NVDSALVTAT VKPDNKYAKC IGSVKAKKGC WSFLKGGFLW DSTFTSSEID FQSSDRAKKF VEIEIVSYSL QPFTEREWKL NQFEGIKRER KRGVTIHVVD
201: KNGLRVPGAA VKLSQLSTDF PIGTMISRTI LENLPYQEWF LKRFKATVFE NELKWYKTEP LPGQYNYTVV DEMMKFVRKN KLIVRGHNMF WDDPTYVQDW
301: LENMTAPQLQ TAMNGRIKSV MRKYRNEFFH WDVNNELLHF DFYEKKLGPK ATLDMFKSMQ REDPLTTLFL NEYNIVERCD SKANVDSYID RFKELKKGGV
401: KVAGIGLESH FSAPNPAFMR AVLDKLATLK LPMWLTEVDV SNMYGQEEQA VFLEQILREA FSHPSVNGIM LWTARSIGGC YQTCLTDEKF QNLPTGDVID
501: QLVLNEWTTG TKRGKTNEFG SYNFRGFLGE FKVSIIYNRT IVNSTFSLGH GVDTKHITIH V

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.