Factsheet for TraesCS2A01G061600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G075000.1	Wheat	plastid	97.12	93.75
TraesCS2D01G060800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	98.2	88.21
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	94.96	87.42
Os05t0304900-01	Rice	extracellular, vacuole	74.1	83.4
EES10525	Sorghum	plasma membrane, vacuole	84.17	81.53
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	80.4	77.74
AT4G38300.1	Thale cress	mitochondrion	29.86	59.93
PGSC0003DMT400021703	Potato	mitochondrion	38.85	56.99
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	57.73	56.32
KRH51408	Soybean	extracellular	55.76	56.26
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	33.99	56.08
PGSC0003DMT400015813	Potato	cytosol	50.9	55.93
KRH60710	Soybean	extracellular	54.86	54.76
TraesCS4A01G071100.2	Wheat	vacuole	54.14	53.65
AT4G38650.1	Thale cress	vacuole	53.96	53.38
Solyc01g111340.2.1	Tomato	extracellular	51.8	52.65
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	53.24	52.48
CDX90288	Canola	endoplasmic reticulum, extracellular	53.24	52.48
CDY12095	Canola	vacuole	44.96	51.33
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	39.57	50.69
VIT_03s0038g02180.t01	Wine grape	cytosol	56.65	50.4
Solyc11g040330.1.1	Tomato	extracellular	48.74	49.36
Solyc10g055370.1.1	Tomato	vacuole	47.66	47.24
PGSC0003DMT400085040	Potato	cytosol	16.01	43.0
Solyc10g055340.1.1	Tomato	cytosol	16.73	42.27
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	38.31	37.11
TraesCS4A01G045800.1	Wheat	vacuole	38.31	36.54
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	37.05	35.89
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	34.71	32.88
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	34.71	32.88
TraesCS2A01G584800.1	Wheat	plastid, vacuole	35.07	32.02
TraesCS5A01G441700.1	Wheat	cytosol	27.7	28.15
TraesCS5A01G441400.1	Wheat	cytosol	27.52	27.62
TraesCS3A01G038200.1	Wheat	cytosol	27.7	27.11
TraesCS5A01G441600.1	Wheat	cytosol	26.26	26.59
TraesCS3A01G038000.1	Wheat	cytosol	27.7	25.0
TraesCS4A01G292300.1	Wheat	cytosol	30.22	22.8
TraesCS2A01G122200.1	Wheat	mitochondrion	29.86	15.09

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS2A01G061600	EnsemblPlants:TraesCS2A01G061600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:-:27555228..27560289

Molecular Weight (calculated)

61900.2 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.210

Length

556 amino acids

Sequence
(BLAST)

001: MKPTAVLLPL LLLAASLAPH ASSADGVRYD YKAYTECKGH PEPALYNGGI LRWAKKIKDF RTADEGNYSP SFVLYNMSAG MAYSFSCWVK FNGPGTIHVK
101: AKIMSLDNAG SQCLGTALVR NDCWSFLKGG FTLNSPSQTS VLYFQAATAN ASMVSIRSAS LQPFSPEQWS QHREDRIQLI RKRFVNVHVS DSSGARVVGA
201: KVAVHQMSRD FPFGSAISKT ILGNKPYQDW FKKRFNAAVF ENELKWYATE PAPGKEDYAL ADQLLQFVQS SDAVARGHNI FWEDPKYTPW WVKNLTSADQ
301: LRAAVAGRIE SLLSRYKGDF VHWDVSNEML HFDFYESRLG RNATTDFFRT AKRADPLATL FLNDFNVVEV CDDLSSSADS YVSRLRQLAD AGVTFEGIGL
401: EAHFAKPNIP YVRAVLDKLG TLRLPIWLTE VDISNALDPK TQAAYLEEVL REGFAHPSVD GIMLWTAMDA SAACYQMCLT DGNFTNLPAG DVVDRLLGEW
501: QTREVLGATN DRGSFNFSAF LGEYKLSVTY LNSSAEGTFS LARSDDTKHI TIRLQP

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.