Factsheet for TraesCS4A01G292300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G019500.1	Wheat	cytosol	96.74	98.07
TraesCS4B01G021800.1	Wheat	cytosol	96.47	97.8
HORVU4Hr1G003220.3	Barley	cytosol	95.93	95.8
EER93683	Sorghum	cytosol	84.67	83.42
Zm00001d013561_P001	Maize	extracellular	84.53	83.29
Os03t0672900-00	Rice	extracellular	80.46	78.44
TraesCS3A01G038200.1	Wheat	cytosol	38.13	49.47
TraesCS5A01G441600.1	Wheat	cytosol	35.41	47.54
TraesCS5A01G441400.1	Wheat	cytosol	35.69	47.47
TraesCS5A01G441700.1	Wheat	cytosol	34.87	46.98
TraesCS3A01G038000.1	Wheat	cytosol	36.23	43.34
TraesCS2A01G122200.1	Wheat	mitochondrion	52.92	35.45
TraesCS4A01G071100.2	Wheat	vacuole	24.42	32.09
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	22.8	30.22
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	23.34	29.97
TraesCS4A01G045800.1	Wheat	vacuole	21.98	27.79
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	21.44	26.92
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	21.44	26.92
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	20.76	26.66
TraesCS2A01G584800.1	Wheat	plastid, vacuole	21.98	26.6

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	ncoils:Coil	InterPro:GH10
InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000
InterPro:IPR008979	PFAM:PF00331	PFAM:PF02018	PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF15	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS4A01G292300
EnsemblPlants:TraesCS4A01G292300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:595192015..595194917

Molecular Weight (calculated)

81245.5 Da

IEP (calculated)

5.245

GRAVY (calculated)

-0.246

Length

737 amino acids

Sequence
(BLAST)

001: MGGNAGGRAG DGGEDDNIIL NPEFDGGLDG WSGSGCKIEL HDSLDDGKVL PATGKYFVAA TGRTDTWNGV MQDVTARLQR KTAYEVAATV RLSGANVSPC
101: EVRATLAVQT TDGRQQYIAV GKLQASDKDW AQLQGKFLLN STVAKATIYI EGPKAGVDLL LDCLVVKHAQ KAPPCSPPDF QNLEYGANII QNSNLDDGLN
201: CWFPLGPCAL AVRDGSPRVL PPMAQESLAL DDEPLNGKHI HVTGRTQTWM GPAQIITDKL TLHATYQVSA WVRVAGQMTG AQNINIAVAV DSQWLNGGQV
301: LARDERWYEI GGSFRVEAKP ASRAMVYVQG PDAGLDLMVA GFQVFPVDRK ARVKHLRKIT DKVRKRDVVV KLTGADGAVV QAAECVDVRV RQVSNSFPLG
401: ACIMRTNMDN EDFVDFFTKN FNWAVFGNEL KWYWTEPQRG QVNYADADDL LKLCSDNGMC VRGHCIFWEV DNMVQQWVKT LSTDDLSAAV KSRIDSLLTR
501: YKGKFRHYDV NNEMLHGSFY QDKLGKDIRA TMFKTASELD PDALLFVNDY NVEGMCDIRA TPEAYIEQII GLQEQGAPVS GVGLQGHVSN PVGPVIRNVL
601: DRLAVLGLPL WFTELDVSAA NEYVRADDLE VMLREAYAHP AVEGVMLWGF WELFMSRDSA HLVNAEGDIN EAGRRLLQLK KEWLTHAHGH ADENGEFKFR
701: GHHGAYHVDV VTPTGCKITQ EFTVDKDDSP MVLNINV

Best Arabidopsis Sequence Match ( AT4G08160.1 )
(BLAST)

001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL

Arabidopsis Description

Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.