Factsheet for HORVU4Hr1G003220.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, vacuole
MultiLoc:	vacuole
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G019500.1	Wheat	cytosol	95.12	96.56
TraesCS4B01G021800.1	Wheat	cytosol	94.72	96.15
TraesCS4A01G292300.1	Wheat	cytosol	95.8	95.93
Zm00001d013561_P001	Maize	extracellular	83.74	82.62
EER93683	Sorghum	cytosol	83.6	82.49
Os03t0672900-00	Rice	extracellular	80.08	78.17
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	33.74	47.88
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	36.31	47.6
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	36.31	47.27
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	34.55	46.53
HORVU3Hr1G007460.1	Barley	cytosol	37.8	41.39
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	37.67	39.89
HORVU5Hr1G106260.1	Barley	cytosol	17.62	36.01
HORVU2Hr1G021350.12	Barley	mitochondrion	52.71	35.27
HORVU2Hr1G113150.1	Barley	cytosol	21.14	29.1
HORVU4Hr1G063790.23	Barley	vacuole	21.95	28.52
HORVU1Hr1G023120.1	Barley	extracellular	21.54	27.65
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	22.49	27.48
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	21.54	27.23
HORVU4Hr1G070260.12	Barley	vacuole	21.27	25.7
HORVU5Hr1G056740.1	Barley	vacuole	20.33	25.34

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	EMBL:AK369547	InterPro:CenC_carb-bd	ncoils:Coil
UniProt:F2E076	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU4Hr1G003220	EnsemblPlants:HORVU4Hr1G003220.3	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF15
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0002007850	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E076]

Coordinates

chrchr4H:-:6470718..6474160

Molecular Weight (calculated)

81697.1 Da

IEP (calculated)

5.118

GRAVY (calculated)

-0.245

Length

738 amino acids

Sequence
(BLAST)

001: MAMGGNNNEG RVGDDDNVIL NPEFDSGLDG WSGSGCKIEL HDSLDDGKVL PATGKYFVAA TGRTDTWNGV MQDVTARLQR KTAYEVAATV RLSGASSVSP
101: CEVRATLAVQ TADGRQQYIS VGKLQASDKD WAQLQGKFLL NSTVAKATIY IEGPKAGVDL LLDCLLVKHA QKAPPCSPPD FQNLEYGANI IENSNLDDGL
201: NCWFPLGPCA LAVRDGSPRV LPPMAQESLA LDDEPLNGKH IHVTNRTQTW MGPAQIITDK LTLHATYQVS AWVRVAGQMS GAQNINIAVA VDSQWVNGGQ
301: VLARDERWYE IGGSFRVEAK PASRVMVYVQ GPDAGLDLMV AGFQIFPVDR KARVKHLRKL TDKVRKRDVV VKLTAADGAV LQAAECVEVR VRQVSNSFPL
401: GACIMRTNMD NEDFVDFFTK HFNWAVFGNE LKWYWTEPQR GQVSYADADD LLKLCSDNGM CVRGHCIFWE VDNMVQQWVK TLSTDDLSAA VKSRIDGLLT
501: RYKGKFRHYD VNNEMLHGSF YQDKLGKDIR ATMFKTASEL DPDALLFVND YNVEGMCDIR ATPEAYIEQI IGLQEQGAPV SGVGLQGHVS NPVGPVIRNV
601: LDRLAVLGLP LWFTELDVSA ENEYVRADDL EVMLREAYAH PAVEGVMLWG FWELFMSRDS AHLVNAEGDI NEAGRRLLQL KKEWLTHAHG QADENGEFKF
701: RGHHGAYHVD VVMPTGCKIT QEFTVDKDDS PMVLNINV

Best Arabidopsis Sequence Match ( AT4G08160.1 )
(BLAST)

001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL

Arabidopsis Description

Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.