Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G041700.1 | Wheat | cytosol | 79.82 | 95.39 |
| TraesCS3A01G038200.1 | Wheat | cytosol | 79.82 | 94.72 |
| TraesCS3B01G045600.1 | Wheat | mitochondrion | 89.91 | 93.23 |
| Os01t0134900-01 | Rice | extracellular | 67.36 | 81.51 |
| EES00361 | Sorghum | cytosol | 66.77 | 79.79 |
| Zm00001d039946_P001 | Maize | cytosol | 48.66 | 78.66 |
| HORVU5Hr1G106210.1 | Barley | cytosol, extracellular | 53.71 | 63.84 |
| HORVU5Hr1G106270.1 | Barley | extracellular, vacuole | 53.26 | 63.77 |
| HORVU5Hr1G106250.2 | Barley | cytosol, mitochondrion, vacuole | 48.52 | 62.88 |
| HORVU5Hr1G106280.1 | Barley | cytosol, extracellular, vacuole | 50.59 | 62.23 |
| HORVU5Hr1G106260.1 | Barley | cytosol | 27.6 | 51.52 |
| HORVU3Hr1G007470.1 | Barley | extracellular, plastid, vacuole | 50.59 | 48.92 |
| HORVU4Hr1G003220.3 | Barley | cytosol | 41.39 | 37.8 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 22.85 | 28.73 |
| HORVU2Hr1G021350.12 | Barley | mitochondrion | 45.55 | 27.83 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 22.7 | 26.61 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 22.85 | 26.37 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 23.89 | 26.35 |
| HORVU2Hr1G011550.11 | Barley | plasma membrane, plastid, vacuole | 23.59 | 26.32 |
| HORVU4Hr1G063790.23 | Barley | vacuole | 21.66 | 25.7 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 22.26 | 25.34 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | UniProt:A0A287K1T6 | InterPro:CenC_carb-bd | InterPro:GH10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:HORVU3Hr1G007460 | EnsemblPlants:HORVU3Hr1G007460.1 |
| InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 | PFAM:PF02018 | PRINTS:PR00134 | PFscan:PS51760 |
| PANTHER:PTHR31490 | PANTHER:PTHR31490:SF14 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | UniParc:UPI000B46666B |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:17886386..17889052
Molecular Weight (calculated)
73398.2 Da
IEP (calculated)
6.549
GRAVY (calculated)
-0.264
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: RDATARPCAS FTVTQKQGER ERQKGKKRMH GLWRCGGCFE PLQYFATAVR CAAFELLRRD PDGRPSPLYI PPAAAIPPPS HRTTAPPATD DKHAPPPLPP
101: PRPLSSMACS CAHGVEFDAN VIRNSALEDG LAGWAAVGAC TELSVRHEES ARVPTETIND VEDGYRPSGR YILAAGRGGE EDGLCQAIPA GALKPRVTYR
201: VAGWIGLGDG AAGEHAVRVN IRLDGGEGGE CAMVVEGGAV CAEAGRWTEI KGVFRLKAIP PSGAAVHVQG APPGVDVKVM DLQVFATDRK ARFKKLRKKT
301: DKVRRRDVVL KFAGAGASSA VSGASIRVMQ MDTSFAFGAC INPAVIQEPA FVDYFTKHFD WAVFENELKW YHTEAVQGQL NYADPDALLD FCDRHGKPVR
401: GHCIFWAVDR MVQKWVKDLP NDQLAAAVQG RLTSLLTRYA GRFPHYDVNN EMLHGTFFQD RLGDDINAFM FKETARIDPG AALFVNDYNV EGGSDPSATP
501: DKYIAQVNAL MEKGAPVGGI GLQGHVTNPA GEIICDALDK LATTDLPVWL TELDVCESDV CLRAEDLEVV LREAYAHPAV EGVVLWGFMQ GHMWRQDACL
601: VNADGTINDA GQRFINLRQE WTSHARGKID SDGNFKFRGY HGSYVVQLAT ATGKMHKAFS VDKGDTPLVL DMDV
101: PRPLSSMACS CAHGVEFDAN VIRNSALEDG LAGWAAVGAC TELSVRHEES ARVPTETIND VEDGYRPSGR YILAAGRGGE EDGLCQAIPA GALKPRVTYR
201: VAGWIGLGDG AAGEHAVRVN IRLDGGEGGE CAMVVEGGAV CAEAGRWTEI KGVFRLKAIP PSGAAVHVQG APPGVDVKVM DLQVFATDRK ARFKKLRKKT
301: DKVRRRDVVL KFAGAGASSA VSGASIRVMQ MDTSFAFGAC INPAVIQEPA FVDYFTKHFD WAVFENELKW YHTEAVQGQL NYADPDALLD FCDRHGKPVR
401: GHCIFWAVDR MVQKWVKDLP NDQLAAAVQG RLTSLLTRYA GRFPHYDVNN EMLHGTFFQD RLGDDINAFM FKETARIDPG AALFVNDYNV EGGSDPSATP
501: DKYIAQVNAL MEKGAPVGGI GLQGHVTNPA GEIICDALDK LATTDLPVWL TELDVCESDV CLRAEDLEVV LREAYAHPAV EGVVLWGFMQ GHMWRQDACL
601: VNADGTINDA GQRFINLRQE WTSHARGKID SDGNFKFRGY HGSYVVQLAT ATGKMHKAFS VDKGDTPLVL DMDV
0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.