Factsheet for Zm00001d039946_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00361	Sorghum	cytosol	90.17	66.67
Zm00001d039958_P001	Maize	cytosol	42.45	66.29
Os01t0134900-01	Rice	extracellular	84.89	63.55
Zm00001d016558_P001	Maize	plastid	60.91	58.8
TraesCS3D01G041700.1	Wheat	cytosol	78.9	58.33
TraesCS3A01G038200.1	Wheat	cytosol	78.18	57.39
TraesCS3B01G045600.1	Wheat	mitochondrion	79.14	50.77
HORVU3Hr1G007460.1	Barley	cytosol	78.66	48.66
Zm00001d013561_P001	Maize	extracellular	56.35	31.42
Zm00001d028398_P003	Maize	golgi, vacuole	37.17	27.34
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	35.25	25.57
Zm00001d048151_P001	Maize	vacuole	32.85	23.58
Zm00001d028103_P001	Maize	extracellular, vacuole	32.37	23.28
Zm00001d019586_P008	Maize	mitochondrion	55.16	20.93
Zm00001d030468_P001	Maize	cytosol	29.5	20.88
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	31.89	20.21

Protein Annotations

MapMan:21.2.2.2.4	Gene3D:3.20.20.80	UniProt:A0A1D6MLW7	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0045493	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	ProteinID:ONM30205.1	PFAM:PF00331
PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14	SMART:SM00633	SUPFAM:SSF51445
UniParc:UPI000844D0D7	EnsemblPlantsGene:Zm00001d039946	EnsemblPlants:Zm00001d039946_P001	EnsemblPlants:Zm00001d039946_T001	SEG:seg	:

Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein

Coordinates

chr3:+:20167524..20169961

Molecular Weight (calculated)

46054.0 Da

IEP (calculated)

4.532

GRAVY (calculated)

-0.225

Length

417 amino acids

Sequence
(BLAST)

001: MACTQEVVVF GVNLLESGAP EDDGLVAGWA AVGPCTALSA RDEEPAKVRK RDVVLNFGSA ASGISGASIR VMQMDSSFPF GTCINTNVIQ NPGFVDFFAK
101: HFDWAVFENE LKWYHTEAQQ GQLNYSDSDA LLDFCDRYGK PVRGHCIFWA VANTVQQWVK NLDDDQLASA VRARLQSLLT RYAGRFPHYD VNNEMLHGSY
201: YQDRLGDDIN AFMFREAARL DPGATLFVND YNVEGGSDPN ATPEKYIEQI SALQQKGAAV GGIGLQGHVT NPVGEIICDA LDKLATTDLP VWLTELDVSE
301: SDVDLRAEDL EVVLREAYAH PAVEGVIFWG CMQGHMWRQD ACLIDADGNV NDAGERFVDL RREWTSHARG QIDSAGHFKF RGYHGTYIVQ LATATGKVHK
401: TFSVEKGDTP LVLDMNL

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.