Factsheet for Zm00001d025082_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plastid
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10525	Sorghum	plasma membrane, vacuole	89.22	89.37
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	77.74	80.4
Os05t0304900-01	Rice	extracellular, vacuole	69.04	80.36
TraesCS2B01G075000.1	Wheat	plastid	78.61	78.47
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	78.78	75.0
TraesCS2D01G060800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	78.78	73.18
AT4G38300.1	Thale cress	mitochondrion	28.35	58.84
PGSC0003DMT400021703	Potato	mitochondrion	37.91	57.52
PGSC0003DMT400015813	Potato	cytosol	49.91	56.72
KRH51408	Soybean	extracellular	52.87	55.17
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	54.43	54.91
KRH60710	Soybean	extracellular	52.35	54.04
Solyc01g111340.2.1	Tomato	extracellular	51.3	53.93
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	31.3	53.41
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	52.35	53.37
CDX90288	Canola	endoplasmic reticulum, extracellular	52.17	53.19
Zm00001d028398_P003	Maize	golgi, vacuole	52.35	53.09
AT4G38650.1	Thale cress	vacuole	51.65	52.85
CDY12095	Canola	vacuole	43.83	51.75
Solyc11g040330.1.1	Tomato	extracellular	48.7	51.0
VIT_03s0038g02180.t01	Wine grape	cytosol	54.61	50.24
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	36.87	48.85
Solyc10g055370.1.1	Tomato	vacuole	45.04	46.17
PGSC0003DMT400085040	Potato	cytosol	15.83	43.96
Solyc10g055340.1.1	Tomato	cytosol	15.65	40.91
Zm00001d028103_P001	Maize	extracellular, vacuole	36.87	36.55
Zm00001d048151_P001	Maize	vacuole	36.7	36.32
Zm00001d039958_P001	Maize	cytosol	16.7	35.96
Zm00001d039946_P001	Maize	cytosol	25.57	35.25
Zm00001d030468_P001	Maize	cytosol	34.78	33.96
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	38.43	33.59
Zm00001d016558_P001	Maize	plastid	24.0	31.94
Zm00001d013561_P001	Maize	extracellular	29.22	22.46
Zm00001d019586_P008	Maize	mitochondrion	31.3	16.38

Protein Annotations

EntrezGene:100216852	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	ProteinID:AQK42910.1	ProteinID:AQK42913.1
InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979
UniProt:K7TJG7	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00022191F9	EnsemblPlantsGene:Zm00001d025082
EnsemblPlants:Zm00001d025082_P002	EnsemblPlants:Zm00001d025082_T002	SEG:seg	:	:	:

Description

Glycosyl hydrolase family 10 protein

Coordinates

chr10:+:102925323..102930804

Molecular Weight (calculated)

63347.1 Da

IEP (calculated)

5.136

GRAVY (calculated)

-0.215

Length

575 amino acids

Sequence
(BLAST)

001: MEAAAATTAA ALLPPARKVF ILPLLLLLAA SSLVPRASSD GAQYDYRAYT ECKPHPEPAL YNGGVLRWAS KITDFRTEDE GNYSPAFVLY NMSAATAYSF
101: SCWVKIDGPE SAHVKAKILT VENAASQCVG TAIARNDCWS FLKGGFTLNS TSQTSVLYLQ TASPNASTIS IRSPSLQPFS PDQWNQHREE RIQQIRKRFV
201: NLHVSDGNGS RVVGADVAVH QITRDFPFGS AISKSILGNG PYQDWFNARF NAAVFENELK WYATEPSPGK EEYGAADQLL RFVQSNDVTA RGHNIFWEDP
301: RYTPAWVKNL TGPELRAAVA GRVQSLLSRY KGDFVHWDVS NEMLHFDFYE DRLGGNATAD FFSTARRADP LATLFLNDFN VVEACDDLSS SADSYVSRLR
401: QLADDAGVTF EGIGLEGHFA KPNVPYVRAV LDKLGTLRLP VWLTEVDVSA AFDHATQAAY LEDVLREGFA HPAVDGIVLW TAMGANATCY QMCLTDADFT
501: NLPAGDVVDR LLGEWQTKEV LGATDDRGSF NFSAFYGEYR LSVTYLNRTA DATFSLPRSD DTKHINIRLP PGPAA

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.