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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010733.1-P Field mustard endoplasmic reticulum, plasma membrane 98.05 98.05
CDY12095 Canola vacuole 82.27 95.28
AT4G38650.1 Thale cress vacuole 85.28 85.59
AT4G38300.1 Thale cress mitochondrion 41.67 84.84
KRH51408 Soybean extracellular 62.94 64.43
PGSC0003DMT400021703 Potato mitochondrion 41.84 62.27
KRH60710 Soybean extracellular 61.17 61.94
PGSC0003DMT400031416 Potato cytosol, mitochondrion 35.46 59.35
GSMUA_Achr5P11430_001 Banana extracellular, vacuole 59.04 58.42
PGSC0003DMT400015813 Potato cytosol 51.77 57.71
Os05t0304900-01 Rice extracellular, vacuole 49.11 56.07
PGSC0003DMT400059688 Potato cytosol, mitochondrion 42.55 55.3
Solyc11g040330.1.1 Tomato extracellular 53.72 55.19
VIT_03s0038g02180.t01 Wine grape cytosol 60.99 55.04
Solyc01g111340.2.1 Tomato extracellular 53.19 54.84
TraesCS2A01G061600.1 Wheat extracellular, plasma membrane, vacuole 52.48 53.24
EES10525 Sorghum plasma membrane, vacuole 53.37 52.44
Zm00001d025082_P002 Maize endoplasmic reticulum, extracellular, plastid 53.19 52.17
TraesCS2B01G075000.1 Wheat plastid 52.66 51.56
Solyc10g055370.1.1 Tomato vacuole 51.06 51.34
HORVU2Hr1G011550.11 Barley plasma membrane, plastid, vacuole 53.01 49.5
Solyc10g055340.1.1 Tomato cytosol 18.44 47.27
PGSC0003DMT400085040 Potato cytosol 15.96 43.48
CDY28323 Canola vacuole 37.06 37.52
CDY69164 Canola vacuole 37.77 37.17
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 37.77 37.17
CDY48433 Canola vacuole 38.12 37.13
CDX72432 Canola cytosol 10.11 36.77
CDY48434 Canola vacuole 37.23 36.65
CDY28325 Canola vacuole 37.41 36.44
CDX71170 Canola cytosol, plastid, vacuole 28.37 35.24
CDY49378 Canola plasma membrane, vacuole 35.28 34.79
CDY49599 Canola extracellular, vacuole 20.21 32.2
CDY49377 Canola extracellular, vacuole 32.27 31.93
CDX72430 Canola extracellular, vacuole 31.56 31.39
CDY49598 Canola cytosol 10.28 30.69
CDX72434 Canola cytosol, vacuole 36.17 23.26
CDY29140 Canola cytosol 29.43 19.46
CDY48844 Canola cytosol 29.61 18.13
CDY53797 Canola cytosol 29.61 18.13
TraesCS1D01G329900.1 Wheat peroxisome 2.84 17.98
CDX75175 Canola cytosol 29.43 17.4
CDY53833 Canola endoplasmic reticulum, extracellular 30.14 11.69
CDY22606 Canola endoplasmic reticulum, vacuole 30.14 11.68
Protein Annotations
Gene3D:2.60.120.260Gene3D:3.20.20.80MapMan:35.1GO:A0A078DSX6EnsemblPlants:CDX90288ProteinID:CDX90288
ProteinID:CDX90288.1InterPro:GH10GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00150862001InterPro:Galactose-bd-like_sfInterPro:Glycoside_hydrolase_SF
InterPro:IPR001000InterPro:IPR008979PFAM:PF00331PFscan:PS51760PANTHER:PTHR31490PANTHER:PTHR31490:SF3
MetaCyc:PWY-6784SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00114UniParc:UPI0004EDB09F::::
Description
BnaA08g16960D
Coordinates
chrLK031862:+:1078716..1081438
Molecular Weight (calculated)
63715.3 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.278
Length
564 amino acids
Sequence
(BLAST)
001: MKHSSIIGFI FCAIYSLLAA FILVSSSNDG PFYDSTAYTE CRAEPEKPLY NGGMLKGEEA SVSGRDTLRS IGASYTPAYI LHNLTQNTIY CFSIWVKIEA
101: GSASTARVRA KLRSDNATLN CVGSVSAKQG CWSFLKGGFL LDSPSQLSIL FFETTNDDGK TQLEVASASL QPFTQDQWKN NQDYFINTAR KRAVTIHVAG
201: ENGESVEGAL VNVEQISKDF PIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP HQGKLNYTFA DKMMSFVRAN RIIARGHNIF WEDPKYTPDW
301: VRNLTGEDLR SAVNQRIRSL MTRYRGEFVH WDVSNEMLHF DFYESRLGKN ASYELFAAAR ELDSLATLFL NDFNVVETCS DERSTVDEYI ARVRELERYD
401: GGGMRMDGVG LEGHFTRPNV ALMRANLDKL ATLELPVWLT EIDISSTLDH RTQAIYLEQV LREGFSHPSV NGIILWTALH PNGCYQMCLT DDKFINLPTG
501: DVVDKKLLEW TTGEVKAKTD DHGTFSFLGF LGEYRVSIIY EGKTVNSSFS LSRDPETKHV RLRI
Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)
001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI
Arabidopsis Description
At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.