CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036392.1-P	Field mustard	cytosol	81.92	55.34
KRG91114	Soybean	nucleus	12.71	53.57
CDX71170	Canola	cytosol, plastid, vacuole	61.58	48.02
AT2G14690.1	Thale cress	vacuole	71.75	44.56
CDX72430	Canola	extracellular, vacuole	57.06	35.63
CDY49377	Canola	extracellular, vacuole	56.78	35.26
KRH35662	Soybean	cytosol, nucleus, vacuole	32.77	28.02
KRH35663	Soybean	plasma membrane, vacuole	44.63	27.19
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	43.79	26.72
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	35.59	21.99
CDY69164	Canola	vacuole	35.59	21.99
CDY28323	Canola	vacuole	33.9	21.54
CDY48434	Canola	vacuole	34.75	21.47
CDY28325	Canola	vacuole	35.03	21.42
CDY48433	Canola	vacuole	35.03	21.42
CDX90288	Canola	endoplasmic reticulum, extracellular	32.2	20.21
CDY49378	Canola	plasma membrane, vacuole	29.66	18.36
CDY12095	Canola	vacuole	22.03	16.02
CDX72434	Canola	cytosol, vacuole	33.9	13.68
CDY29140	Canola	cytosol	22.03	9.14
CDY48844	Canola	cytosol	23.45	9.01
CDY53797	Canola	cytosol	23.45	9.01
CDX75175	Canola	cytosol	22.03	8.18
CDY53833	Canola	endoplasmic reticulum, extracellular	23.73	5.78
CDY22606	Canola	endoplasmic reticulum, vacuole	23.73	5.77
CDY49598	Canola	cytosol	2.26	4.23
KRG91115	Soybean	cytoskeleton, cytosol, plastid	1.41	2.79
CDX72432	Canola	cytosol	0.56	1.29

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	GO:A0A078IJN6	UniProt:A0A078IJN6	EnsemblPlants:CDY49599
ProteinID:CDY49599	ProteinID:CDY49599.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00093438001	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490
PANTHER:PTHR31490:SF18	MetaCyc:PWY-6784	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniPathway:UPA00114	UniParc:UPI0004EECE53	:	:	:	:

Description

BnaAnng10280DBnaAnng10280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJN6]

Coordinates

chrLK032846:-:59382..61231

Molecular Weight (calculated)

41427.3 Da

IEP (calculated)

10.102

GRAVY (calculated)

-0.304

Length

354 amino acids

Sequence
(BLAST)

001: MKRFNNGVFH FVVFISILLF LGPGLSMHPF SYDHSLKSEC LMELPQTINT GEGFQELKIK ENGENGKVVE RVNLQKGGIY SISAWVKLRN EKERAVRITL
101: RGKNVRYVDG GQVIAKKGCW SLLKGGFIVN VSAPVDILFK SDGSAAAEIN VQNVRLQRFN KTHWRLQQDQ VIEKIRKSKV RFQVSFQNKS TVEGSLISIK
201: QIRPSFLLGC AMNYRILESD SYREWFVSRF RLTSFTNEMK WYTTEEVRGQ ENYTLADAMM QLAEENKVLV KGHTVLWDDK KWQPIWVKSI TDPDDLKNVT
301: LNRMNSVMKR YKGRLIGWDV INENLHYSYY EDIFFFFFWL KMLKRFSYDL LFGL

Best Arabidopsis Sequence Match ( AT2G14690.1 )
(BLAST)

001: MKRFNYGFFH LVLFLISLLL LGSGICMDPF SYDQSLKSEC LMEPPQTTAN TGGEGVKELK INENGGIRNV VEGVDLREGN IYITSAWVKL RNESQRKVGM
101: TFSEKNGRNV FGGEVMAKRG CWSLLKGGIT ADFSGPIDIF FESDGLAGLE ISVQNVRMQR FHKTQWRLQQ DQVIEKIRKN KVRFQMSFKN KSALEGSVIS
201: IEQIKPSFLL GCAMNYRILE SDSYREWFVS RFRLTSFTNE MKWYATEAVR GQENYKIADS MMQLAEENAI LVKGHTVLWD DKYWQPNWVK TITDPEDLKN
301: VTLNRMNSVM KRYKGRLIGW DVMNENVHFN YFENMLGGNA SAIVYSLASK LDPDIPLFLN EFNTVEYDKD RVVSPVNVVK KMQEIVSFPG NNNIKGGIGA
401: QGHFAPVQPN LAYMRYALDT LGSLSFPVWL TEVDMFKCPD QVKYMEDILR EAYSHPAVKA IILYGGPEVS GFDKLTLADK DFKNTQAGDL IDKLLQEWKQ
501: EPVEIPIQHH EHNDEEGGRI IGFSPEISLL HGHYRVTVTN PSMKNLSTRF SVEVTKESGH LQEVQLVIDA

Arabidopsis Description

1,4-beta-xylan endohydrolase [Source:UniProtKB/TrEMBL;Acc:Q680B7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.