CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytoskeleton, cytosol

Predictor Summary:

cytosol 2
plastid 2
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49598	Canola	cytosol	40.78	38.62
CDX72432	Canola	cytosol	31.28	36.13
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	88.27	27.24
KRH35663	Soybean	plasma membrane, vacuole	87.15	26.85
Bra017610.1-P	Field mustard	extracellular, vacuole	44.13	17.25
CDX71170	Canola	cytosol, plastid, vacuole	41.9	16.52
KRH35662	Soybean	cytosol, nucleus, vacuole	34.64	14.98
AT4G33810.3	Thale cress	extracellular, vacuole	45.81	14.41
Bra036392.1-P	Field mustard	cytosol	41.9	14.31
CDY49377	Canola	extracellular, vacuole	45.25	14.21
CDX72430	Canola	extracellular, vacuole	44.69	14.11
AT4G33820.1	Thale cress	extracellular, vacuole	44.13	13.86
AT2G14690.1	Thale cress	vacuole	44.13	13.86
KRH29254	Soybean	cytosol	40.78	12.9
KRH29253	Soybean	extracellular, vacuole	37.43	11.84
KRH51408	Soybean	extracellular	36.31	11.8
KRH60710	Soybean	extracellular	35.2	11.31
KRH52165	Soybean	cytosol, nucleus	26.82	6.47
KRH61477	Soybean	cytosol	25.7	6.21
KRH15483	Soybean	mitochondrion	29.05	5.59
KRH05535	Soybean	mitochondrion	28.49	5.48
CDY49599	Canola	extracellular, vacuole	2.79	1.41
KRG91114	Soybean	nucleus	0.0	0.0

Protein Annotations

EMBL:ACUP02012662	EnsemblPlants:KRG91115	EnsemblPlantsGene:GLYMA_20G134500	Gene3D:3.20.20.80	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31490
PANTHER:PTHR31490:SF18	ProteinID:KRG91115	ProteinID:KRG91115.1	SUPFAM:SSF51445	UniParc:UPI000294C56F	UniProt:K7N399
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:37410821..37411888

Molecular Weight (calculated)

19402.1 Da

IEP (calculated)

4.611

GRAVY (calculated)

0.047

Length

179 amino acids

Sequence
(BLAST)

001: MSLTSLNIAS GDEASCPAKY IKILKEILSF PGVSGMSAAI GLQGHFASGQ PNLAYMRSGL DLLATTVLPI WLTEASVDPQ PSQAEYLEEV LRESYSHPAV
101: EGIIMFSGPA QAGFNTTMLA DETFKNTAAR DVVCKLIQEW GTGSHIATAD NRGVVDISLH HDDYDVTVTY PLIHWKPFM

Best Arabidopsis Sequence Match ( AT4G33820.1 )
(BLAST)

001: MNSIKNGFFL CMIFLLWCHV DSGVSIDPFS HSHSLNTECV MKPPRSSETK GLLQFSRSLE DDSDEEWKID GNGFIREMAQ RIQLHQGNIY SFSAWVKLRE
101: GNDKKVGVVF RTENGRLVHG GEVRANQECW TLLKGGIVPD FSGPVDIFFE SENRGAKISA HNVLLKQFSK EEWKLKQDQL IEKIRKSKVR FEVTYENKTA
201: VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK ITSFTNEMKW YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK
301: DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS FYNLAFKIDP DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN
401: MKGAIGAQGH FGPTQPNLAY IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ YVEDILREAY SHPAVKGIII FGGPEVSGFD KLTLADKDFN NTQTGDVIDK
501: LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH PWIANLSTSF SLEVTKEMDQ DQVIRVVISA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84WT5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.