Factsheet for Bra017610.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49377	Canola	extracellular, vacuole	98.47	79.12
AT4G33810.3	Thale cress	extracellular, vacuole	83.19	66.96
AT4G33820.1	Thale cress	extracellular, vacuole	80.13	64.39
KRG91114	Soybean	nucleus	9.83	53.57
Bra036392.1-P	Field mustard	cytosol	58.73	51.34
KRG91115	Soybean	cytoskeleton, cytosol, plastid	17.25	44.13
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	46.72	36.9
KRH35663	Soybean	plasma membrane, vacuole	46.29	36.49
KRH35662	Soybean	cytosol, nucleus, vacuole	28.82	31.88
Bra034585.1-P	Field mustard	vacuole	38.65	30.89
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	36.9	29.44
Bra034584.1-P	Field mustard	vacuole	36.46	29.14
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	32.75	26.6
Bra017609.1-P	Field mustard	nucleus	37.77	25.94
Bra027867.1-P	Field mustard	cytosol	25.11	12.49
Bra039768.1-P	Field mustard	cytosol	26.2	12.2
Bra031698.1-P	Field mustard	cytosol	26.86	11.64

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	EnsemblPlantsGene:Bra017610	EnsemblPlants:Bra017610.1	EnsemblPlants:Bra017610.1-P	InterPro:GH10
InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	UniProt:M4DM78	PFAM:PF00331
ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF18	SMART:SM00633	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541177	:	:	:

Description

AT4G33810 (E=3e-208) | glycosyl hydrolase family 10 protein

Coordinates

chrA03:+:29271197..29273557

Molecular Weight (calculated)

52648.0 Da

IEP (calculated)

6.688

GRAVY (calculated)

-0.408

Length

458 amino acids

Sequence
(BLAST)

001: MKNFNNGFFP SMLFLLICLV YSGLANDPFS HSHSLKTESE DREAKISVTK LSLKQFSKKE WKLKQDQLIE KIRKNKVRFE VTYNNKTAVK DAVISLKQTK
101: PFFLLGCAMN FRILQSEGYR KWFASRFAIT SFTNEMKWYT TEKVRGQENY TAADSMLKFA EENDILVRGH TVLWDDPKMQ PSWVENIKDP EDVRNVTLNR
201: INSVMKRYKG KLTGWDVVNE NLHWDYFEKM LGVNASSRFY NLAYKLDPDV TLFVNEYNTI ENPGEVTATP VKVKDKMEEI LAYQGNENIK GAIGAQGHFS
301: PIQPNLAYMR SALDTLGSLG LPVWITELDM PKCPNQAKYI EEILREVYSH PAVEGIIIFA GPEVSGFDKL TLADKDFNIT ETGDVIDKLL KEWHQKTSDI
401: PNIFMVDHEN EEEDVSLLHG LYNVNVSHPQ IKNFSTSLRL EVTKEMGPRQ VVRVVINA

Best Arabidopsis Sequence Match ( AT4G33810.5 )
(BLAST)

001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.