CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05535	Soybean	mitochondrion	94.3	94.2
KRH52165	Soybean	cytosol, nucleus	65.16	81.67
KRH61477	Soybean	cytosol	64.84	81.38
VIT_18s0001g08370.t01	Wine grape	mitochondrion	75.27	73.92
PGSC0003DMT400012713	Potato	cytosol, extracellular, nucleus	31.08	72.25
Solyc12g088210.1.1	Tomato	mitochondrion	68.6	69.27
PGSC0003DMT400030115	Potato	mitochondrion	67.96	68.62
PGSC0003DMT400012716	Potato	mitochondrion	70.97	68.25
AT1G58370.2	Thale cress	cytosol	67.63	66.56
Bra027867.1-P	Field mustard	cytosol	65.81	66.45
CDY48844	Canola	cytosol	65.7	66.34
CDY53797	Canola	cytosol	65.48	66.12
AT4G08160.1	Thale cress	cytosol	52.47	64.89
Solyc04g077190.2.1	Tomato	extracellular	70.65	57.43
CDY29140	Canola	cytosol	52.04	56.74
CDX75175	Canola	cytosol	52.04	50.73
Bra039768.1-P	Field mustard	cytosol	52.47	49.59
HORVU2Hr1G021350.12	Barley	mitochondrion	55.05	46.42
TraesCS2A01G122200.1	Wheat	mitochondrion	54.84	46.36
TraesCS2D01G124900.1	Wheat	mitochondrion	54.73	46.27
EER96324	Sorghum	mitochondrion	54.41	46.08
Zm00001d019586_P008	Maize	mitochondrion	53.76	45.5
Os07t0456700-01	Rice	plasma membrane	53.76	45.41
TraesCS2B01G144300.3	Wheat	mitochondrion	54.73	45.04
GSMUA_Achr1P24570_001	Banana	cytosol	55.27	43.38
KRH51408	Soybean	extracellular	19.46	32.85
KRH60710	Soybean	extracellular	19.57	32.67
KRG91114	Soybean	nucleus	2.8	30.95
KRG91115	Soybean	cytoskeleton, cytosol, plastid	5.59	29.05
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	18.06	28.97
KRH35662	Soybean	cytosol, nucleus, vacuole	12.58	28.26
KRH35663	Soybean	plasma membrane, vacuole	17.53	28.06
KRH29254	Soybean	cytosol	16.45	27.03
KRH29253	Soybean	extracellular, vacuole	15.27	25.09

Protein Annotations

EntrezGene:100816678	Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	EMBL:ACUP02008608	InterPro:CenC_carb-bd
InterPro:GH10	EnsemblPlantsGene:GLYMA_14G091300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF
InterPro:IPR001000	InterPro:IPR008979	UniProt:K7M5U1	EnsemblPlants:KRH15483	ProteinID:KRH15483	ProteinID:KRH15483.1
ProteinID:KRH15484.1	ProteinID:KRH15485.1	PFAM:PF00331	PFAM:PF02018	PRINTS:PR00134	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF15	MetaCyc:PWY-6784	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445
UniParc:UPI000233B712	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:8457339..8463492

Molecular Weight (calculated)

103880.0 Da

IEP (calculated)

6.935

GRAVY (calculated)

-0.326

Length

930 amino acids

Sequence
(BLAST)

001: MKRFSACCFT SRISKFHSHW KRNHSRSQIM AGIISGPSGS EGVNILLNHD FSSELNSWHL NNCTGYVISA ESGNQGGISM ESNVNYVVIT DRKECWQGLE
101: QDITNRISIG STYTVSACVG VSGLSQRSSD VIATLKLEYH DSATRYLFIG RTSVNKDSWE KLEGTFSLST MPHRVIFYLE GPAPGVDLLI RSVEINCSTP
201: NNSTTSTGCV SAGDDNIIIN PQFDDGLNNW SGRGCKIMLH DSMNDGKIVP KSGKFFASAT ERTQSWNGIQ QEITGRVQRK LAYEVTALVR IFGNNVSTAD
301: VRATLWVQTP DLREQYIGIA KVQATDKDWV TMQGKFLLNG SPSKVVLYLE GPPPGTDILL NNLILKHAAK TPPSTPPDLK NIAFGVNIIE NSNLADSTNG
401: WFPLGNCTLS VKTGSPHIIP PMARDSLGSH EFLSGRYILV TNRTQTWMGP AQTITDKVKL FVTYQVSAWV RIGSGSSGPQ NVNVALGVDN QWVNGGQTQV
501: SDDMWHEIGG SFRIEKQPSK VMVYVQGPAS GVDLMVAGLQ IFPVDRHTRF RYLKIQTDKI RKRDVILKFS GLDSGSYANT SVKVIQTQND FPIGTCISRM
601: NIDNEDFVNF VVKHFNWAVF ENELKWYWTE PQQGNFNYKD ADNLLSLCQK HKIQTRGHCI FWEVDETVQQ WIKSLNKNDL MTAVQNRLNG LLTRYKGKFS
701: HYDVNNEMLH GSFYQDRLGK DIRANMFKTA NQLDPSATLF VNDYHVEDGR DTRSSPDKYI HHILDLQEQG APVGGIGIQG HIDSPIGPIV SSSLDKLGIL
801: GLPIWFTELD VSSVNEYVRA DDLEVMLREA MAHPTVEGIM LWGFWELFMS RDNSHLVNAE GDINEAGKRF LSLKQEWLSH SRGHVDEQGQ YNFRGFHGTY
901: DVQVVTPSKK ISKTFVLDKG DSPLVVSIDL

Best Arabidopsis Sequence Match ( AT1G58370.2 )
(BLAST)

001: MKRFTVCCFS NKIHKNGDRN PDKKSRESME VSRKDNEEPE KQNNNNVASI IGSDRTNVIV NHDFSSGMHS WHPNCCEAFV VTAESNVSHG VLDPSKCGSY
101: VVVKNRKETW QGLEQDITNR VKPCSLYKVS ATVAVSGPVH GLVEVMATLK LESQQSQTNY QFIAKTCVFK EKWVRLEGMF SLPSLPEKVV FYLEGPSPGI
201: DLLIQSVTIH RESEPELERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT ERTQNWNGIQ QEITGKVQRK RVYEATAVVR
301: IYGNNVTTAT VQATLWVQNP NQRDQYIGIS TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE NPAFGVNILT
401: NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID
501: SQWVNGGQVE INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK IRKRDVILKF AGVDSSKFSG ASVRVRQIRN
601: SFPVGTCISR SNIDNEDFVD FFLKNFNWAV FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD LNNAVQNRLT
701: DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI
801: VCSALDKLGI LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA EGDVNEAGKR FLAVKKDWLS HANGHIDQNG
901: AFPFRGYSGN YAVEVITTSS SKVLKTFGVD KEDSSQVITV DLQGL

Arabidopsis Description

RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.