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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031698.1-P Field mustard cytosol 71.8 98.77
CDY22606 Canola endoplasmic reticulum, vacuole 96.49 96.36
AT1G10050.3 Thale cress endoplasmic reticulum, plasma membrane, vacuole 62.38 82.83
CDY48844 Canola cytosol 37.48 59.17
CDY53797 Canola cytosol 37.35 58.96
CDY29140 Canola cytosol 30.88 52.64
EER96324 Sorghum mitochondrion 37.55 49.73
TraesCS2A01G122200.1 Wheat mitochondrion 37.48 49.55
Zm00001d019586_P008 Maize mitochondrion 37.41 49.5
Os07t0456700-01 Rice plasma membrane 37.41 49.41
TraesCS2D01G124900.1 Wheat mitochondrion 37.35 49.36
HORVU2Hr1G021350.12 Barley mitochondrion 37.14 48.96
TraesCS2B01G144300.3 Wheat mitochondrion 37.28 47.96
CDX75175 Canola cytosol 30.74 46.86
GSMUA_Achr1P24570_001 Banana cytosol 36.24 44.47
CDX72432 Canola cytosol 3.37 31.61
CDX90288 Canola endoplasmic reticulum, extracellular 11.69 30.14
CDY12095 Canola vacuole 9.49 28.34
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 10.73 27.23
CDY69164 Canola vacuole 10.73 27.23
CDY28323 Canola vacuole 10.32 26.93
CDY28325 Canola vacuole 10.59 26.6
CDY48434 Canola vacuole 10.45 26.53
CDY48433 Canola vacuole 10.52 26.42
CDY49377 Canola extracellular, vacuole 10.25 26.14
CDX72430 Canola extracellular, vacuole 10.04 25.75
CDY49378 Canola plasma membrane, vacuole 9.97 25.35
CDX71170 Canola cytosol, plastid, vacuole 7.7 24.67
CDY49599 Canola extracellular, vacuole 5.78 23.73
CDY49598 Canola cytosol 2.96 22.75
CDX72434 Canola cytosol, vacuole 10.11 16.76
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:2.60.120.260
MapMan:21.2.2.2.4Gene3D:3.20.10.10Gene3D:3.20.20.80Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4
MapMan:4.2.7.1GO:A0A078IXT6UniProt:A0A078IXT6InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-like
InterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY53833ProteinID:CDY53833ProteinID:CDY53833.1InterPro:CenC_carb-bd
ncoils:CoilInterPro:GH10InterPro:GH10_ASGO:GO:0003674GO:GO:0003824GO:GO:0004084
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0008652
GO:GO:0009058GO:GO:0009081GO:GO:0009082GO:GO:0009987GO:GO:0016740GO:GO:0016787
GO:GO:0016798GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00011518001InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979PFAM:PF00331PFAM:PF01063PFAM:PF02018
ScanProsite:PS00591ScanProsite:PS00770PFscan:PS51760PANTHER:PTHR31490PANTHER:PTHR31490:SF15MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
MetaCyc:PWY-6784SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445SUPFAM:SSF56752SignalP:SignalP-noTM
TIGRFAMs:TIGR01123UniPathway:UPA00114UniParc:UPI0004EECC9FSEG:seg::
Description
BnaA09g57250DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IXT6]
Coordinates
chrLK033241:+:46998..54558
Molecular Weight (calculated)
161495.0 Da
IEP (calculated)
5.990
GRAVY (calculated)
-0.289
Length
1454 amino acids
Sequence
(BLAST)
0001: MPIGLLLQLI ISLLSSPLRH SKATTLMAHS NIVHNGDFSD GLEPWHPNAC QAFVVSSDSS SSDSGYAVVT NRKETWQGLE QDITPQVSPG VTYNVSACVG
0101: VSGPFHESSQ VLATVRLEHD DSPTEYIFVG KTYASRDKWV DLEGTFSISN MPDRVVIYLE GPPPGKDLLI RSVTVKESTS CDFQETEENK AAFSVYPPPL
0201: NIITNHDFSD GLCSWNSNSC DSFVVGSNEC NSESYAVVNN RSETWQGLEQ DITDRVSPGC SYKVSASVSV WGPVQRSAQV LATLKLEHQG SPTEFKLIGK
0301: TYVSNDVWKT LEGTFALSGR PDRVVFFLEG PPPGVDLLIK SVTIHCESDN QFERSRDFSS APEADHHHIF LNSSFSDGLN HWSGRGCNLM LHESLADGRI
0401: LPHSGTCFAS ATERTHKWSG IEQDITERVQ RKLIYEASSV VRLSHSHHTV QATLYVQYLD QREEYIGISS VEANHDDWVK LKGKFLLNGS PARAVVYIEG
0501: PPPGIDVFVD HFEVKPAEKP PPSRRPYIES HVFGMNIVSN SHLTDGTIEG WFPLGDCHLR VGEGSPQILP PLAKHSLRTT HDYLSGRYVL ATNRSGTWMG
0601: PAQMITDKVK LFLTYQVSAW VKVGSGGLTC PQDVNIALSV DGKWVNGGKV EVKDGDWHEV VGSFRIEKQA REVMLHVQGP SPGVDLMVAG LQIFAVDHKA
0701: RLSYLKGQAD MVRKRNVRLK VTGLDPNELS GATVKIRQTN NSFPLGSCIS RSNIDNEDFV EFFLNNFKWA VFGNELKWSW TEPEQGNLNY RDADEMLRFC
0801: ETYNVQTRGH CIFWEVESAI QPWVQQLSEP TLEAAVENRL TDLLTRYNGK FRHYDVNNEM LHGSFYRDKL GFDARAKMFR TAHELDPLAR LFLNEYHIED
0901: GFDSRSSPEK YIKLVHKLQK KGAPVGGIGI QGHITSPVGH IVRNALDKLS TLGLPIWFTE LDVSSVNEHV RGDDLEVMLW EAFAHPAVEG VMLWGFWELF
1001: MSREDAHLVD ADGEVNEAGR RFLEIKREWL TFVEGVVEDG EGGFEFRGYH GSYVVEVVTC EGSSSTTKNK GSVKMIKTIS SLRKSLLALP IHVHIRKLQT
1101: FSKYNAQAAS ALEERKKLFY QDDEYADMDW DNLGFALTPA DYMYVMKCSK DGEFTKGELS RFGNIQLSPS AGAIYEGTKA YRKENGKVLL FRPDHNAVRM
1201: QHGAERMLMP SPSVDQFVDA VKQTALANKR WVPPSGKASL YIRPLLMGTG PVLGLGPAPE YTFIVYASPV GNYFKEGVAA LDLYVEEEYA RAAPGGSGGV
1301: KSITNYAPVL KALSRAKSLG FSDVLYLDSV KKKYLEEASA CNVFVVKGRT ISTPATNGTI LEGITRKSVM EIAGDQGYQV VEKAVHVDEV MDADEVFCTG
1401: TAVGVAPVGT ITYQDKRVEY ETGDESVCQK LRSVLVGIQT GLVEDTKGWV TCIN
Best Arabidopsis Sequence Match ( AT1G10050.3 )
(BLAST)
0001: MSVGFLFLQL ITFLCPLASL FSSFPFKVQA KLMADLNIVM NGDFFAGIEP WYPNGCEAFV VSSDPFSSEV MSADSSSGGY VVVTNRKETW QGLEQDITTR
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.