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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53833 Canola endoplasmic reticulum, extracellular 96.36 96.49
AT1G10050.3 Thale cress endoplasmic reticulum, plasma membrane, vacuole 62.43 83.01
CDY48844 Canola cytosol 37.64 59.5
CDY53797 Canola cytosol 37.5 59.28
CDY29140 Canola cytosol 30.7 52.4
EER96324 Sorghum mitochondrion 37.29 49.45
TraesCS2A01G122200.1 Wheat mitochondrion 37.29 49.36
Zm00001d019586_P008 Maize mitochondrion 37.16 49.23
TraesCS2D01G124900.1 Wheat mitochondrion 37.09 49.09
Os07t0456700-01 Rice plasma membrane 37.02 48.96
HORVU2Hr1G021350.12 Barley mitochondrion 36.88 48.69
TraesCS2B01G144300.3 Wheat mitochondrion 36.88 47.52
CDX75175 Canola cytosol 30.56 46.65
GSMUA_Achr1P24570_001 Banana cytosol 35.99 44.22
CDX72432 Canola cytosol 3.37 31.61
CDX90288 Canola endoplasmic reticulum, extracellular 11.68 30.14
CDY12095 Canola vacuole 9.41 28.13
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 10.71 27.23
CDY69164 Canola vacuole 10.71 27.23
CDY28323 Canola vacuole 10.3 26.93
CDY48434 Canola vacuole 10.44 26.53
CDY28325 Canola vacuole 10.51 26.42
CDY49377 Canola extracellular, vacuole 10.3 26.32
CDY48433 Canola vacuole 10.44 26.25
CDX72430 Canola extracellular, vacuole 10.1 25.93
CDY49378 Canola plasma membrane, vacuole 9.89 25.17
CDX71170 Canola cytosol, plastid, vacuole 7.69 24.67
CDY49599 Canola extracellular, vacuole 5.77 23.73
CDY49598 Canola cytosol 2.95 22.75
CDX72434 Canola cytosol, vacuole 10.03 16.65
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:2.60.120.260
MapMan:21.2.2.2.4Gene3D:3.20.10.10Gene3D:3.20.20.80Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4
MapMan:4.2.7.1GO:A0A078GB75UniProt:A0A078GB75InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CSInterPro:Aminotransferase-like
InterPro:BCAT_familyInterPro:B_amino_transIIEnsemblPlants:CDY22606ProteinID:CDY22606ProteinID:CDY22606.1InterPro:CenC_carb-bd
ncoils:CoilInterPro:GH10InterPro:GH10_ASGO:GO:0003674GO:GO:0003824GO:GO:0004084
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0008652
GO:GO:0009058GO:GO:0009081GO:GO:0009082GO:GO:0009987GO:GO:0016740GO:GO:0016787
GO:GO:0016798GO:GO:0052654GO:GO:0052655GO:GO:0052656EnsemblPlantsGene:GSBRNA2T00019268001InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979PFAM:PF00331PFAM:PF01063PFAM:PF02018
ScanProsite:PS00591ScanProsite:PS00770PFscan:PS51760PANTHER:PTHR31490PANTHER:PTHR31490:SF15MetaCyc:PWY-5057
MetaCyc:PWY-5076MetaCyc:PWY-5078MetaCyc:PWY-5101MetaCyc:PWY-5103MetaCyc:PWY-5104MetaCyc:PWY-5108
MetaCyc:PWY-6784SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445SUPFAM:SSF56752SignalP:SignalP-noTM
TIGRFAMs:TIGR01123UniPathway:UPA00114UniParc:UPI0004EE8FC9SEG:seg::
Description
BnaC08g42400DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GB75]
Coordinates
chrLK032134:-:32163..43015
Molecular Weight (calculated)
161652.0 Da
IEP (calculated)
5.958
GRAVY (calculated)
-0.290
Length
1456 amino acids
Sequence
(BLAST)
0001: MPIGLLLQLI TSLLLLSPLR HSKATTLMAY SNIVHNGDFS DGLEPWYPNA CQAFVVSSDS SSSDSGYAVV TNRKETWQGL EQDITPQVSP GVTYNVSACV
0101: GVSGPFHESS QVLATVRLER DDSPTEYLFI GKTYASRDKW VDLEGTFSIS NMADRVVIYL EGPAPGKDLL IRSVTVKDST SRDFQEKEEN KAAFSVYPPA
0201: LNIIENHDFS GGLCSWNSNS CDSFVVGSNE CNSESYAVVN NRSETWQGLE QDITDRVSPG CSYKVSASVS VWGPVQRSAQ VLATLKLEHQ GSETEFKLIG
0301: KTYVSNDVWK TLEGTFALSG RPDRVVFFLE GPPPGVDLLI KSVTIHCESD NQFERSRDFS SAPEADHHHI FLNSSFSDGL NHWSGRGCNL MLHESLADGR
0401: ILPHSGTCFA SATERTHKWS GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVEANHDDWV KLKGKFLLNG SPARAVVYIE
0501: GPPPGIDVFV DHFEVKPAEK PPPSRRPYIE SHVFGMNIVS NSHLTDGTIE GWFPLGDCHL RVGEGSPQIL PPLARHSLRT THEYLSGRYV LATNRSGTWM
0601: GPAQMITDKV KLFLTYQVSA WVKVGSGGGL TCPQDVNIAL SVDGKWVNGG KVEVKDGDWH EVVGSFRIEK QAKKVMLHAQ GPSPGVDLMV AGLQIFAVDH
0701: KARLSYLKGQ ADMVRKRNVR LKVTGLDPNE LSGATVKIRQ TSNSFPLGSS ISRSNIDNED FVEFFLNNFK WAVFGNELKW SWTEPEQGNL NYRDADEMLG
0801: FCETYNVETR GHCIFWEVES AIQPWVQELS EPTLEAAVEN RLTDLLTRYN GKFRHYDVNN EMLHGSFYRD KLGFDARAKM FRTAHELDPL ARLFLNEYHI
0901: EDGFDSRSSP EKYIKLVHKL QKKGAPVGGI GIQGHITSPV GHIVRNALDK LSTLGLPIWF TELDVSSVNE HVRGDDLEVM LWEAFAHPAV EGVMLWGFWE
1001: LFMSREHAHL VDADGEVNEA GKRFLEIKRE WLTFVEGGVE DEGGFEFRGY HGSYVVEVVT CEGSSSTTKN KGSAIVKMIK TISSLRKSLA LPIHLHIRTL
1101: QTFSKYNAQA ASAVEEREKL FYQNEEYADM DWDNLGFALT PADYMYVMKC SKDGDFTKGE LTRFGNIELS PSAGAIYEGT KAYRKDNGKL LLFRPDHNAV
1201: RMQHGAERML MPSPSVDQFV DAVKQTAFAN KRWVPPSGKG SLYIRPLLMG TGPVLGLGPA PEYTFIVYAS PVGNYFKEGV AALNLYVEEE HTRAAPGGSG
1301: GVKSITNYAP VLKALSRAKS LGYSDVLYLD SVKKKYLEEA SACNVFIVKG RTISTPATNG TILEGITRKS VMEIACDQGY QVVEKAVHVD EVMDADEVFC
1401: TGTAVGVAPV GTITYQDKRV EYETGDESVC QKLRSVLVGI QTGLVEDTKG WVTCIN
Best Arabidopsis Sequence Match ( AT1G10050.3 )
(BLAST)
0001: MSVGFLFLQL ITFLCPLASL FSSFPFKVQA KLMADLNIVM NGDFFAGIEP WYPNGCEAFV VSSDPFSSEV MSADSSSGGY VVVTNRKETW QGLEQDITTR
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.