Factsheet for TraesCS3B01G045600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G041700.1	Wheat	cytosol	83.85	96.63
TraesCS3A01G038200.1	Wheat	cytosol	84.15	96.3
HORVU3Hr1G007460.1	Barley	cytosol	93.23	89.91
Os01t0134900-01	Rice	extracellular	69.54	81.15
EES00361	Sorghum	cytosol	68.92	79.43
Zm00001d039946_P001	Maize	cytosol	50.77	79.14
TraesCS5B01G445300.1	Wheat	cytosol	55.38	65.45
TraesCS5B01G445500.1	Wheat	cytosol	52.92	62.66
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	55.23	61.9
TraesCS3B01G045700.2	Wheat	vacuole	51.54	54.03
TraesCS4B01G021800.1	Wheat	cytosol	43.54	38.93
TraesCS4B01G227000.1	Wheat	vacuole	25.23	29.23
TraesCS4B01G259100.1	Wheat	vacuole	24.31	27.72
TraesCS4B01G259400.1	Wheat	vacuole	24.77	27.62
TraesCS2B01G075000.1	Wheat	plastid	23.85	26.91
TraesCS2B01G537100.1	Wheat	vacuole	23.23	26.31
TraesCS2B01G144300.3	Wheat	mitochondrion	45.08	25.93
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	22.46	25.44

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS3B01G045600	EnsemblPlants:TraesCS3B01G045600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:+:22915591..22917785

Molecular Weight (calculated)

70753.0 Da

IEP (calculated)

5.706

GRAVY (calculated)

-0.208

Length

650 amino acids

Sequence
(BLAST)

001: MHGLWRRCGG CFEPLQYFAT GVRCAFELLR RDLDGRPFPL YIRPAAVIPP QPHRTTAAPA SDDKHAPPLP PTVSAMACSC AHDVVFDANV IRNSALEDGL
101: AGWAPLGACT ELSVRHEEPA RVPTQTINDV EDGYRPSGRY ILVAGRGGEE DGLCQAIPAG ALKPRVTYRV AGWIGLGDGA AEEHAVRVNI RLGGDEGEEE
201: GGEGGECALV VEAGAVCAEA GKWTEIKGVF RLKASPASGA GVHVQGAPAG VDVKVMDLQV FATDRKARFK KLRKKTDKVR KRDVVLKFAG AGASSGVSGA
301: SIRVMQMDTS FAFGACINPA VIQEPAFVDY FTKHFDWAVF ENELKWYHTE AVQGQLNYAD PDALLDFCDR HGKPVRGHCI FWAVDRMVQK WVKDLPNDQL
401: AAAVQGRLTS LLTRYAGRFP HYDVNNEMLH GTFFQDRLGD DVNAFMFKET ARLDPGAALF VNDYNVEGGG DPNATPEKYI AQVNALMEKG APVGGIGLQG
501: HVTNPAGEII CDALDKLATT DLPVWLTELD VCESDVCLRA EDLEVVLREA YAHPAVEGVV LWGFMQGHMW RQDACLVNSD GTINDAGQRF INLRQEWTSH
601: ARGKIDSDGN FKFRGYHGSY VVQLATATGK MHKAFSVDKG DTPLVLDMDV

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.