Factsheet for TraesCS5B01G445700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G449000.1	Wheat	cytosol	86.9	90.97
TraesCS5A01G441700.1	Wheat	cytosol	81.72	86.65
TraesCS5B01G445300.1	Wheat	cytosol	78.1	82.36
TraesCS5B01G445500.1	Wheat	cytosol	77.76	82.15
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	27.76	71.88
Zm00001d016558_P001	Maize	plastid	43.28	58.1
TraesCS3B01G045600.1	Wheat	mitochondrion	61.9	55.23
KXG30265	Sorghum	plastid	60.34	54.69
TraesCS3B01G045700.2	Wheat	vacuole	53.97	50.48
TraesCS4B01G021800.1	Wheat	cytosol	46.55	37.14
TraesCS4B01G227000.1	Wheat	vacuole	27.59	28.52
TraesCS4B01G259100.1	Wheat	vacuole	27.07	27.54
TraesCS4B01G259400.1	Wheat	vacuole	27.59	27.44
TraesCS2B01G075000.1	Wheat	plastid	26.21	26.39
TraesCS2B01G537100.1	Wheat	vacuole	26.03	26.31
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	25.69	25.96
TraesCS2B01G144300.3	Wheat	mitochondrion	46.55	23.89

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	ScanProsite:PS00591
PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF17	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445
EnsemblPlantsGene:TraesCS5B01G445700	EnsemblPlants:TraesCS5B01G445700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:617600181..617602009

Molecular Weight (calculated)

63676.2 Da

IEP (calculated)

5.028

GRAVY (calculated)

-0.170

Length

580 amino acids

Sequence
(BLAST)

001: MAGTQVCTLL ASGTHTVSSC VYLIHLHGAH VCRFFQDVNL DGSVTGCTPF GSRTTTLSLH NEEEAAITAG NGDGNNPSGR YILVAGRADE KDGLRQVITR
101: GFLKPGVTYR VAGWISLGAG AARGTSHAVC VTMDDDEIES LQVECGAVCA VVGAWTEIMG AFRLRTEPRS AAVCVHGAPA GVDIKVMDLR VYQTDREARF
201: RQLEEKTDKA RKRDVVLKLG AATGAASVRV VQMDNSFPFG TCINTTVIQN PAFLDFFTNH FDWAVFENEL KWYHTEAQQG QLNYADADAL LALCDQLGKR
301: VRGHCVFWSV DGDVQQWVKN LDKDQLKSAV QSRLEGLVSR YAAKFPHYDV NNEMLHGQFF RDRLGDEDVP AFMFKEVARL DPEPALFVND FNVECGNDPD
401: ATPEKYAEQV AWLQSCGAVV RGIGLQGHVS NPVGEVVCAA LDRLATTGVP IWFTELDVSE PDVGLRAKDL EVVLREAYAH PAVEGVVLWG FMQGSMWRQD
501: AWLVDADGTV NEAGQMFLNL QREWKTDARG NADGDGNFKF RGFHGRYFVE VTTATGCRML KTFTVEKGDN TPLLVNLGDA

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.