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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • vacuole 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016558_P001 Maize plastid 55.0 81.48
Os05t0319900-00 Rice cytosol, mitochondrion, plastid, vacuole 26.88 76.79
EES00361 Sorghum cytosol 57.81 65.6
TraesCS5D01G448600.1 Wheat cytosol 56.09 65.39
TraesCS5B01G445300.1 Wheat cytosol 55.94 65.09
HORVU5Hr1G106250.2 Barley cytosol, mitochondrion, vacuole 52.81 65.0
TraesCS5A01G441400.1 Wheat cytosol 56.25 64.98
TraesCS5A01G441700.1 Wheat cytosol 54.53 63.8
HORVU5Hr1G106280.1 Barley cytosol, extracellular, vacuole 54.38 63.5
HORVU5Hr1G106270.1 Barley extracellular, vacuole 55.78 63.41
HORVU5Hr1G106210.1 Barley cytosol, extracellular 55.94 63.14
TraesCS5D01G449000.1 Wheat cytosol 53.75 62.09
TraesCS5A01G441600.1 Wheat cytosol 53.12 61.93
TraesCS5B01G445500.1 Wheat cytosol 52.97 61.75
TraesCS5D01G448800.1 Wheat cytosol 51.88 60.69
TraesCS5B01G445700.1 Wheat extracellular, plastid, vacuole 54.69 60.34
EES00362 Sorghum cytosol 50.62 54.55
HORVU5Hr1G106260.1 Barley cytosol 28.75 50.97
EER93683 Sorghum cytosol 43.28 37.03
EER95184 Sorghum vacuole 24.84 28.39
EES10525 Sorghum plasma membrane, vacuole 24.06 26.83
EER96324 Sorghum mitochondrion 43.91 25.59
KXG39936 Sorghum extracellular, vacuole 22.34 24.78
EER92683 Sorghum vacuole 22.03 24.14
KXG34533 Sorghum endoplasmic reticulum, plasma membrane, vacuole 22.5 23.92
EER92684 Sorghum endoplasmic reticulum, extracellular, vacuole 20.78 23.25
Protein Annotations
Gene3D:2.60.120.260MapMan:21.2.2.2.4Gene3D:3.20.20.80EntrezGene:8056077UniProt:A0A194YR13InterPro:GH10
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787InterPro:Galactose-bd-like_sfInterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979EnsemblPlants:KXG30265
ProteinID:KXG30265ProteinID:KXG30265.1ProteinID:OQU84990.1PFAM:PF00331PFscan:PS51760PANTHER:PTHR31490
PANTHER:PTHR31490:SF17MetaCyc:PWY-6784SMART:SM00633EnsemblPlantsGene:SORBI_3004G154000SUPFAM:SSF49785SUPFAM:SSF51445
UniParc:UPI0007F1DC57SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:+:48702790..48708200
Molecular Weight (calculated)
69561.5 Da
IEP (calculated)
7.222
GRAVY (calculated)
-0.211
Length
640 amino acids
Sequence
(BLAST)
001: MQCGWRLQLA CNWCMNSILD LHAPYIHAAS SVPFPRNKSQ DRSKTSTHTT KNSRAPARSY RNHFLQLAAT MACSLQGGDV VVFEVDAIGW APSGARTALS
101: LHHELDPARL PAASAAVRPH GHTPSGRYVL AGGRADEEDG LCQAITPGAL KPRVTYRVAG WISVAAAGAG VGGTTTAHHH PAVHVSIRVD GGRCVMDGGA
201: VACSAAASDD ASSSRWAEIK GGFRLKESPR SAAVHVHGAP AGVDVKVMDL RIIATDRKAR FRYLKDKTDK VRKRDVVVKV GGGAPAGAPV RVVQLDSAFP
301: IGSCINGTVI QDPAFVDFFT NHMDWAVFEN ELKWYWTEAQ RGQLNYGDAD RLLDFCDRAG KPVRGHCIFW AVDAEVQQWI KDLAADELMA AVRARLNGLL
401: GRYAGRFPHY DVNNEMLHGR FFRDRLGDGV APLMFREAAR LDPGAALFVN DYNVECGNDG NATPERYVEL IRGLQRGGAR VGGVGLQGHV THPVGEVICD
501: ALDALAAATE LPVWFTELDV CEPDDALRAD DLEVVMREAF AHPAVQGVVL WGFMQGHMWR QDAALVNADG TVNDAGRRFV ELRREWTSDA RGRLDADGQF
601: KFRGFHGNYV AQVTTPAGTK MLKAFTVDKG DTPLVLDMDN
Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)
0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.