CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039958_P001	Maize	cytosol	42.76	95.13
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	46.46	75.0
TraesCS3A01G038000.1	Wheat	cytosol	71.89	69.32
TraesCS3B01G045700.2	Wheat	vacuole	72.22	69.19
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	71.55	65.79
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	72.39	61.69
EES00361	Sorghum	cytosol	56.57	59.57
KXG30265	Sorghum	plastid	54.55	50.62
EER93683	Sorghum	cytosol	45.29	35.96
EER95184	Sorghum	vacuole	26.77	28.39
EES10525	Sorghum	plasma membrane, vacuole	26.26	27.18
KXG39936	Sorghum	extracellular, vacuole	25.25	26.0
EER96324	Sorghum	mitochondrion	46.8	25.32
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	25.42	25.08
EER92683	Sorghum	vacuole	24.58	25.0
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	23.23	24.13

Protein Annotations

MapMan:21.2.2.2.4	Gene3D:3.20.20.80	UniProt:C5XQT1	EnsemblPlants:EES00362	ProteinID:EES00362	ProteinID:EES00362.1
InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000
InterPro:IPR008979	PFAM:PF00331	PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490
PANTHER:PTHR31490:SF14	MetaCyc:PWY-6784	SMART:SM00633	EnsemblPlantsGene:SORBI_3003G083000	SUPFAM:SSF49785	SUPFAM:SSF51445
unigene:Sbi.11764	UniParc:UPI0001A84791	RefSeq:XP_002455242.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:7119755..7122824

Molecular Weight (calculated)

65030.4 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.384

Length

594 amino acids

Sequence
(BLAST)

001: MAFAEEETKT TTAAAAAHRG KNLIESSCDS EDGCLAGWAP SGSCTLSAHA EDAPLPSLAA TLAAAAADDD SDDEEVQQQR ARKPSGRYVV AAHRASDTDG
101: LCRALSRAPR PKVTYRVAGW VGVGTAVEGS HAVHVEVRVD DDGQGQHVGG GVAVVESGKW GEIKGSFRVD DDDEPPRHAK VYVHGPPAGV DLKVMDLLVS
201: PVNKIPRLRH LRKKADKVRK RDVVLKVNRR TDGDTTESVA GAHIQVIQVQ NSVPIGTCIT KAGMQNPEYV DFFTKHFDWA VLENELKWYY TEAVQGQVSY
301: ADADELINFC DRHGKPVRGH CIFWAVESSV QPWVRALNRD QLRAAVEARL RGLVSRYSGR FPHYEVNNEM LHGDFYAQRL GDDDINAHMF RETARIDPAP
401: ALFVNDYNVE SGNDPNATPE KYVALVTDLQ RRGAPVGGIG VQGHVTHPVG DIICDALDKL AVTGLPVWIT ELDVSAADES VRADDLEIVL REAYAHPAVE
501: GIMLWGFMQG HMWRSHGQLV NADGKYTQAG NMFAGLRREW TSHARGKVDG NGNFKFRGFH GTYQVLLTTA AGEVKKRTFD VNKGDAPLVL DMDF

Best Arabidopsis Sequence Match ( AT1G58370.1 )
(BLAST)

001: MEVSRKDNEE PEKQNNNNVA SIIGSDRTNV IVNHDFSSGM HSWHPNCCEA FVVTAESNVS HGVLDPSKCG SYVVVKNRKE TWQGLEQDIT NRVKPCSLYK
101: VSATVAVSGP VHGLVEVMAT LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT IHRESEPELE RVTAEDETIV
201: VNPNFEDGLN NWSGRSCKIV LHDSMADGKI VPESGKVFAS ATERTQNWNG IQQEITGKVQ RKRVYEATAV VRIYGNNVTT ATVQATLWVQ NPNQRDQYIG
301: ISTVQATDKE WIHLKGKFLL NGSASRVVIY IEGPPPGTDI LLNSLTVKHA EKIPPSPPPS IENPAFGVNI LTNSHLSDDT TNGWFSLGNC TLSVAEGSPR
401: ILPPMARDSL GAHERLSGRY ILVTNRTQTW MGPAQMITDK LKLFLTYQIS VWVKVGSGIN SPQNVNVALG IDSQWVNGGQ VEINDDRWHE IGGSFRIEKN
501: PSKALVYVQG PSSGIDLMVA GLQIFPVDRL ARIKHLKRQC DKIRKRDVIL KFAGVDSSKF SGASVRVRQI RNSFPVGTCI SRSNIDNEDF VDFFLKNFNW
601: AVFANELKWY WTEPEQGKLN YQDADDMLNL CSSNNIETRG HCIFWEVQAT VQQWIQNMNQ TDLNNAVQNR LTDLLNRYKG KFKHYDVNNE MLHGSFYQDK
701: LGKDIRVNMF KTAHQLDPSA TLFVNDYHIE DGCDPKSCPE KYTEQILDLQ EKGAPVGGIG IQGHIDSPVG PIVCSALDKL GILGLPIWFT ELDVSSVNEH
801: IRADDLEVMM WEAFGHPAVE GIMLWGFWEL FMSRDNSHLV NAEGDVNEAG KRFLAVKKDW LSHANGHIDQ NGAFPFRGYS GNYAVEVITT SSSKVLKTFG
901: VDKEDSSQVI TVDLQGL

Arabidopsis Description

RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.