Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013561_P001 | Maize | extracellular | 94.12 | 94.12 |
| TraesCS4D01G019500.1 | Wheat | cytosol | 82.75 | 85.14 |
| TraesCS4B01G021800.1 | Wheat | cytosol | 82.35 | 84.73 |
| TraesCS4A01G292300.1 | Wheat | cytosol | 83.42 | 84.67 |
| HORVU4Hr1G003220.3 | Barley | cytosol | 82.49 | 83.6 |
| Os03t0672900-00 | Rice | extracellular | 82.09 | 81.22 |
| EES00361 | Sorghum | cytosol | 38.1 | 50.53 |
| EES00362 | Sorghum | cytosol | 35.96 | 45.29 |
| KXG30265 | Sorghum | plastid | 37.03 | 43.28 |
| EER96324 | Sorghum | mitochondrion | 54.14 | 36.89 |
| EER95184 | Sorghum | vacuole | 24.6 | 32.86 |
| KXG39936 | Sorghum | extracellular, vacuole | 22.59 | 29.29 |
| EER92683 | Sorghum | vacuole | 22.73 | 29.11 |
| EES10525 | Sorghum | plasma membrane, vacuole | 22.33 | 29.09 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 20.86 | 27.27 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 21.39 | 26.58 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | EntrezGene:8056729 | UniProt:C5WPQ6 | InterPro:CenC_carb-bd |
| ncoils:Coil | EnsemblPlants:EER93683 | ProteinID:EER93683 | ProteinID:EER93683.1 | InterPro:GH10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 |
| PFAM:PF02018 | PRINTS:PR00134 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | MetaCyc:PWY-6784 |
| SMART:SM00633 | EnsemblPlantsGene:SORBI_3001G140300 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | unigene:Sbi.8877 | UniParc:UPI0001A82A1D |
| RefSeq:XP_002466685.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:11195137..11198205
Molecular Weight (calculated)
81874.9 Da
IEP (calculated)
5.164
GRAVY (calculated)
-0.224
Length
748 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIGGDDAA GLVVVVGDGA GDDNIILNPE FDDGLDNWAG NGCKIELHDS LDDGKVLPAN GKYFVAATGR TDTWNGVQQD VTARLQRKLL YEATATVRLH
101: SSAAAVAPCE VRATLGVQTA DGRQQYLGIG KSQVSDKEWV QLQGKILLNS TVAKASIYIE GPPAGVDVLL DSLVVKHAQK APPAPAPDFE NLEYGANIIQ
201: NCNLDDGLNG WFPLGPCTLS VHDGGPRVLP PMAQDSLALG DEPLNGKHIH VTNRTQTWMG PAQIITDKLT LYATYQVSAW VRVGGAAAPQ TINIAFAVDS
301: QWINGGQVMA RDERWYEVGG ALRVETKPAS RVMVYVQGPD AGVDLMVAGL QVFPVDRKAR VKHLRRLTDK VRKRDVVLKV TTGADGAAAA VKDAADGVEV
401: RVRQVSNSFP LGACIMRTNM DNEDFVDFFT KNFNWAVFGN ELKWYWTEPQ RGQMNYADAD DLLRLCSDHG MCVRGHCIFW EVDSAVQQWV KTLSTDDLSA
501: AVSSRINGLL TRYKGKFKHY DVNNEMLHGS FYQDKLGKDI RAAMFKTASE LDPDALLFVN DYNVEGMCDT HATPEAYIQQ IVGLQEQGAP VGGVGLQGHV
601: SNPVGPVIRS VLDRLAVLGL PIWFTEVDVS SANEHVRADD LEVMLREAYA HPAVEGVMLW GFWELFMSRD DAHLVDAEGQ VNEAGRRLLQ LKREWLTHSH
701: GHADENGEYK FRGHHGEYHV DVTTPTGKVS QTFTVDKDDA PLVLNIKV
101: SSAAAVAPCE VRATLGVQTA DGRQQYLGIG KSQVSDKEWV QLQGKILLNS TVAKASIYIE GPPAGVDVLL DSLVVKHAQK APPAPAPDFE NLEYGANIIQ
201: NCNLDDGLNG WFPLGPCTLS VHDGGPRVLP PMAQDSLALG DEPLNGKHIH VTNRTQTWMG PAQIITDKLT LYATYQVSAW VRVGGAAAPQ TINIAFAVDS
301: QWINGGQVMA RDERWYEVGG ALRVETKPAS RVMVYVQGPD AGVDLMVAGL QVFPVDRKAR VKHLRRLTDK VRKRDVVLKV TTGADGAAAA VKDAADGVEV
401: RVRQVSNSFP LGACIMRTNM DNEDFVDFFT KNFNWAVFGN ELKWYWTEPQ RGQMNYADAD DLLRLCSDHG MCVRGHCIFW EVDSAVQQWV KTLSTDDLSA
501: AVSSRINGLL TRYKGKFKHY DVNNEMLHGS FYQDKLGKDI RAAMFKTASE LDPDALLFVN DYNVEGMCDT HATPEAYIQQ IVGLQEQGAP VGGVGLQGHV
601: SNPVGPVIRS VLDRLAVLGL PIWFTEVDVS SANEHVRADD LEVMLREAYA HPAVEGVMLW GFWELFMSRD DAHLVDAEGQ VNEAGRRLLQ LKREWLTHSH
701: GHADENGEYK FRGHHGEYHV DVTTPTGKVS QTFTVDKDDA PLVLNIKV
001: MKRFTVCCFS NKIHKNGDRN PDKKSRESME VSRKDNEEPE KQNNNNVASI IGSDRTNVIV NHDFSSGMHS WHPNCCEAFV VTAESNVSHG VLDPSKCGSY
101: VVVKNRKETW QGLEQDITNR VKPCSLYKVS ATVAVSGPVH GLVEVMATLK LESQQSQTNY QFIAKTCVFK EKWVRLEGMF SLPSLPEKVV FYLEGPSPGI
201: DLLIQSVTIH RESEPELERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT ERTQNWNGIQ QEITGKVQRK RVYEATAVVR
301: IYGNNVTTAT VQATLWVQNP NQRDQYIGIS TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE NPAFGVNILT
401: NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID
501: SQWVNGGQVE INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK IRKRDVILKF AGVDSSKFSG ASVRVRQIRN
601: SFPVGTCISR SNIDNEDFVD FFLKNFNWAV FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD LNNAVQNRLT
701: DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI
801: VCSALDKLGI LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA EGDVNEAGKR FLAVKKDWLS HANGHIDQNG
901: AFPFRGYSGN YAVEVITTSS SKVLKTFGVD KEDSSQVITV DLQGL
101: VVVKNRKETW QGLEQDITNR VKPCSLYKVS ATVAVSGPVH GLVEVMATLK LESQQSQTNY QFIAKTCVFK EKWVRLEGMF SLPSLPEKVV FYLEGPSPGI
201: DLLIQSVTIH RESEPELERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT ERTQNWNGIQ QEITGKVQRK RVYEATAVVR
301: IYGNNVTTAT VQATLWVQNP NQRDQYIGIS TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE NPAFGVNILT
401: NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID
501: SQWVNGGQVE INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK IRKRDVILKF AGVDSSKFSG ASVRVRQIRN
601: SFPVGTCISR SNIDNEDFVD FFLKNFNWAV FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD LNNAVQNRLT
701: DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI
801: VCSALDKLGI LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA EGDVNEAGKR FLAVKKDWLS HANGHIDQNG
901: AFPFRGYSGN YAVEVITTSS SKVLKTFGVD KEDSSQVITV DLQGL
Arabidopsis Description
RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.