Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4B01G021800.1 | Wheat | cytosol | 98.35 | 98.35 |
TraesCS4A01G292300.1 | Wheat | cytosol | 98.07 | 96.74 |
HORVU4Hr1G003220.3 | Barley | cytosol | 96.56 | 95.12 |
EER93683 | Sorghum | cytosol | 85.14 | 82.75 |
Zm00001d013561_P001 | Maize | extracellular | 85.01 | 82.62 |
Os03t0672900-00 | Rice | extracellular | 80.61 | 77.51 |
TraesCS3D01G041700.1 | Wheat | cytosol | 38.24 | 49.29 |
TraesCS5D01G448600.1 | Wheat | cytosol | 36.59 | 48.45 |
TraesCS5D01G448800.1 | Wheat | cytosol | 35.49 | 47.17 |
TraesCS5D01G449000.1 | Wheat | cytosol | 35.63 | 46.75 |
TraesCS3D01G041600.1 | Wheat | extracellular, vacuole | 37.28 | 41.95 |
TraesCS1D01G329900.1 | Wheat | peroxisome | 5.09 | 41.57 |
TraesCS2D01G124900.1 | Wheat | mitochondrion | 53.23 | 35.18 |
TraesCS4D01G227700.1 | Wheat | plasma membrane, vacuole | 24.76 | 32.09 |
TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 23.8 | 30.35 |
TraesCS2D01G510500.1 | Wheat | vacuole | 22.97 | 29.09 |
TraesCS4D01G259100.1 | Wheat | vacuole | 22.15 | 27.62 |
TraesCS2D01G060800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 23.11 | 27.14 |
TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 21.05 | 26.66 |
TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 21.18 | 26.24 |
Protein Annotations
Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | ncoils:Coil | InterPro:GH10 |
InterPro:GH10_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 |
InterPro:IPR008979 | PFAM:PF00331 | PFAM:PF02018 | PRINTS:PR00134 | ScanProsite:PS00591 | PFscan:PS51760 |
PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | EnsemblPlantsGene:TraesCS4D01G019500 |
EnsemblPlants:TraesCS4D01G019500.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:8256219..8259444
Molecular Weight (calculated)
80506.8 Da
IEP (calculated)
5.248
GRAVY (calculated)
-0.220
Length
727 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIADDNIIL NPEFDGGLDG WSGSGCKIEL HDSLDDGKVL PATGKYFVAA TGRTDTWNGV MQDVTARLQR KTAYEVAATV RLSGANVSPC EVRATLAVQT
101: ADGRQQYIAV GKLQASDKDW AQLQGKFLLN STVAKATIYI EGPKAGVDLL LDCLVVKRAQ KAPPCSPPDF ENLEYGANII QNSNLDDGLN CWFPLGPCAL
201: AVRDGSPRVL PPMAQESLAL DDEPLNGKHI HVTGRTQTWM GPAQIITDKL TLHATYQVSA WVRVAGQMSG AQNINIAVAV DSQWLNGGQV LARDERWYEI
301: GGSFRVEAKP ASRVMVYVQG PDAGLDLMVA GFQVFPVDRK ARVKHLRKIT DKVRKRDVVV KLTGTDGTVI QAAECVEVRV RQVSNSFPLG ACIMRTNMDN
401: EDFVDFFTKN FNWAVFGNEL KWYWTEPQRG QVNYADADDL LKLCSDNGMC VRGHCIFWEV DNMVQQWVKT LSTDDLSAAV KSRIDGLLTR YKGKFRHYDV
501: NNEMLHGSFY QDKLGKDIRA TMFKTASELD PDALLFVNDY NVEGMCDIRA TPEAYIEQII GLQEQGAPVS GVGLQGHVSN PVGPVIRNVL DRLAVLGLPL
601: WFTELDVSAA NEYVRADDLE VMLREAYAHP AVEGVMLWGF WELFMSRDSA HLVNAEGDIN EAGRRLLQLK KEWLTHAHGH ADENGEFKFR GHHGAYHVDV
701: VTPTGCKITQ EFTVDKDDSP MVLNINV
101: ADGRQQYIAV GKLQASDKDW AQLQGKFLLN STVAKATIYI EGPKAGVDLL LDCLVVKRAQ KAPPCSPPDF ENLEYGANII QNSNLDDGLN CWFPLGPCAL
201: AVRDGSPRVL PPMAQESLAL DDEPLNGKHI HVTGRTQTWM GPAQIITDKL TLHATYQVSA WVRVAGQMSG AQNINIAVAV DSQWLNGGQV LARDERWYEI
301: GGSFRVEAKP ASRVMVYVQG PDAGLDLMVA GFQVFPVDRK ARVKHLRKIT DKVRKRDVVV KLTGTDGTVI QAAECVEVRV RQVSNSFPLG ACIMRTNMDN
401: EDFVDFFTKN FNWAVFGNEL KWYWTEPQRG QVNYADADDL LKLCSDNGMC VRGHCIFWEV DNMVQQWVKT LSTDDLSAAV KSRIDGLLTR YKGKFRHYDV
501: NNEMLHGSFY QDKLGKDIRA TMFKTASELD PDALLFVNDY NVEGMCDIRA TPEAYIEQII GLQEQGAPVS GVGLQGHVSN PVGPVIRNVL DRLAVLGLPL
601: WFTELDVSAA NEYVRADDLE VMLREAYAHP AVEGVMLWGF WELFMSRDSA HLVNAEGDIN EAGRRLLQLK KEWLTHAHGH ADENGEFKFR GHHGAYHVDV
701: VTPTGCKITQ EFTVDKDDSP MVLNINV
001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL
Arabidopsis Description
Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.