Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G441400.1 | Wheat | cytosol | 93.44 | 92.6 |
| TraesCS5B01G445300.1 | Wheat | cytosol | 91.62 | 91.45 |
| HORVU5Hr1G106210.1 | Barley | cytosol, extracellular | 88.89 | 86.07 |
| HORVU5Hr1G106270.1 | Barley | extracellular, vacuole | 87.07 | 84.9 |
| TraesCS1D01G329900.1 | Wheat | peroxisome | 13.3 | 82.02 |
| TraesCS5D01G449000.1 | Wheat | cytosol | 82.7 | 81.95 |
| TraesCS5D01G448800.1 | Wheat | cytosol | 80.87 | 81.17 |
| Os05t0319900-00 | Rice | cytosol, mitochondrion, plastid, vacuole | 29.69 | 72.77 |
| HORVU5Hr1G106260.1 | Barley | cytosol | 43.9 | 66.76 |
| TraesCS3D01G041700.1 | Wheat | cytosol | 65.39 | 63.65 |
| Zm00001d016558_P001 | Maize | plastid | 46.81 | 59.49 |
| KXG30265 | Sorghum | plastid | 65.39 | 56.09 |
| TraesCS3D01G041600.1 | Wheat | extracellular, vacuole | 56.65 | 48.14 |
| TraesCS4D01G019500.1 | Wheat | cytosol | 48.45 | 36.59 |
| TraesCS4D01G227700.1 | Wheat | plasma membrane, vacuole | 31.15 | 30.48 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 29.33 | 27.62 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 28.23 | 27.19 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 27.69 | 25.89 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 26.59 | 25.44 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 26.59 | 25.44 |
| TraesCS2D01G060800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 28.42 | 25.2 |
| TraesCS2D01G124900.1 | Wheat | mitochondrion | 48.45 | 24.18 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | InterPro:GH10 | InterPro:GH10_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 |
| PFAM:PF00331 | PFAM:PF02018 | ScanProsite:PS00591 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF17 |
| SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | EnsemblPlantsGene:TraesCS5D01G448600 | EnsemblPlants:TraesCS5D01G448600.1 | : |
Description
No Description!
Coordinates
chr5D:-:498084386..498086300
Molecular Weight (calculated)
60450.5 Da
IEP (calculated)
5.405
GRAVY (calculated)
-0.278
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTQDVNMD GSLAGCEAFG SRTTMLSVHS EEETAMLPIT VGGSKPSGRY ILVSGRADEK DGLRQPITTG ALKPRVTYRV AGWISLGAGA ARGTVRVNLG
101: VDEDDNGNEN LVECGVVSAE AGGWTELMGA FRLRTEPRSA AIYVHGAPAG VDVKVMDLRV FQTDRKARFR QLRDKTDKAR KRDVVLKLGA ATGAASVRVV
201: QMDSAFPFGT CINTTVIQNP AFVDFFTNHM DWAVFENELK WYHTEAQQGQ LNYRDADALL DFCDRLGKRA RGHCIFWSAD GAVQQWVKNL DRDQLRSAVQ
301: SRIQGLVSRY AGRFPHYDVN NEMLHGRFFR DRLGDEDVPA FMFKEVARLD PDAALFVNDY NVECANDPNA TPDKYAEQVA WLQSCGAVVR GIGLQGHVSN
401: PVGEVVCGAL DRLAATGVPI WFTELDVCEP DVGLRAQDLE VVLREAYAHP AVEGVVFWGI MQGKMWRKDA WLVDADGTVN EAGQTLLNLQ KEWKTDARGS
501: VDGDGNFKFR GFHGRYVVEV TTPTGKQMLK TFTVEKGDNT PLLVDLADA
101: VDEDDNGNEN LVECGVVSAE AGGWTELMGA FRLRTEPRSA AIYVHGAPAG VDVKVMDLRV FQTDRKARFR QLRDKTDKAR KRDVVLKLGA ATGAASVRVV
201: QMDSAFPFGT CINTTVIQNP AFVDFFTNHM DWAVFENELK WYHTEAQQGQ LNYRDADALL DFCDRLGKRA RGHCIFWSAD GAVQQWVKNL DRDQLRSAVQ
301: SRIQGLVSRY AGRFPHYDVN NEMLHGRFFR DRLGDEDVPA FMFKEVARLD PDAALFVNDY NVECANDPNA TPDKYAEQVA WLQSCGAVVR GIGLQGHVSN
401: PVGEVVCGAL DRLAATGVPI WFTELDVCEP DVGLRAQDLE VVLREAYAHP AVEGVVFWGI MQGKMWRKDA WLVDADGTVN EAGQTLLNLQ KEWKTDARGS
501: VDGDGNFKFR GFHGRYVVEV TTPTGKQMLK TFTVEKGDNT PLLVDLADA
0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.