Factsheet for TraesCS3D01G041600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

mitochondrion 1
vacuole 4
extracellular 4
endoplasmic reticulum 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G038000.1	Wheat	cytosol	89.01	93.34
TraesCS3B01G045700.2	Wheat	vacuole	89.01	92.74
Zm00001d039958_P001	Maize	cytosol	34.06	82.4
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	87.93	81.49
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	42.41	74.46
EES00362	Sorghum	cytosol	65.79	71.55
TraesCS3D01G041700.1	Wheat	cytosol	50.93	58.33
TraesCS5D01G448600.1	Wheat	cytosol	48.14	56.65
TraesCS5D01G448800.1	Wheat	cytosol	47.68	56.31
TraesCS5D01G449000.1	Wheat	cytosol	47.21	55.05
TraesCS1D01G329900.1	Wheat	peroxisome	6.66	48.31
TraesCS4D01G019500.1	Wheat	cytosol	41.95	37.28
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	25.08	28.88
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	24.61	27.89
TraesCS4D01G259100.1	Wheat	vacuole	24.46	27.1
TraesCS2D01G124900.1	Wheat	mitochondrion	44.58	26.18
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	23.37	25.72
TraesCS2D01G060800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	24.15	25.2
TraesCS2D01G510500.1	Wheat	vacuole	21.52	24.22
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	21.52	24.22

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G041600	EnsemblPlants:TraesCS3D01G041600.1	SEG:seg

Description

No Description!

Coordinates

chr3D:-:15965051..15967448

Molecular Weight (calculated)

70854.0 Da

IEP (calculated)

6.256

GRAVY (calculated)

-0.287

Length

646 amino acids

Sequence
(BLAST)

001: MAWALCVKFY WILSQTSTVL REFAGQDVGS KLFMHLLPPD EVPLAMKLMA DGGSSMEKEA GISMKLTEDG GSEEEEEEPA LAVNLLEHHG GSCSEEANGG
101: LGGWASAGSS TLSVHHDHAP PPLSATAEDV PCAHKRKPSG RYVLAAHRAD DKDGLCREIS RAPQPKVTYR VAGWVRLEGC PGADGGHPVH VEVRTQDGAR
201: VGGGVLVAEP GRWAEIKGAF RVDEHPRHAE VYVHGPPAGV DIKVMDMRVC AVDKIARLRH LRKKTDKVRK RDVVLKFSRP SEDGADAAEA VNGASIRVVQ
301: VENSFPLGAC ISKSSIQNPA FVDFFTKHFD WAVLENELKW YYTEPVQGQV SYADADELIA FCDRLKKPVR GHCIFWAVEN SVQPWVRALN TEQLRAAVES
401: RIRGLVSRYS GRFPQYEVNN EMLHGAFFRQ RLGDDIDAHM FRETAAIDPA PALFVNDYNV ESANDPNATP EKYVALITDL QRRGAAVGGI GVQGHVTYPV
501: GDVICDALDK LAATELPVWI TELDVSAADE AVRADDLEVV LREAFAHPAV EGIMLWGFMQ GHMWRSHGQL LNADGTVSQA GNRFMGLRQE WTSHARGKVD
601: ANGHFKFRGF HGKYVVELAA GAGGKQVRRA FDVHKGDEPL VVDMNL

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.