Factsheet for TraesCS3B01G045700.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G038000.1	Wheat	cytosol	95.0	95.62
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	92.74	89.01
Zm00001d039958_P001	Maize	cytosol	35.81	83.15
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	91.77	81.64
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	44.52	75.0
EES00362	Sorghum	cytosol	69.19	72.22
TraesCS5B01G445500.1	Wheat	cytosol	51.13	57.74
TraesCS5B01G445300.1	Wheat	cytosol	50.0	56.36
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	50.48	53.97
TraesCS3B01G045600.1	Wheat	mitochondrion	54.03	51.54
TraesCS4B01G021800.1	Wheat	cytosol	43.71	37.28
TraesCS4B01G227000.1	Wheat	vacuole	26.13	28.88
TraesCS4B01G259100.1	Wheat	vacuole	25.16	27.37
TraesCS2B01G075000.1	Wheat	plastid	24.84	26.74
TraesCS4B01G259400.1	Wheat	vacuole	24.68	26.24
TraesCS2B01G144300.3	Wheat	mitochondrion	46.61	25.58
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	22.42	24.22
TraesCS2B01G537100.1	Wheat	vacuole	21.94	23.69

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3B01G045700	EnsemblPlants:TraesCS3B01G045700.2	SEG:seg

Description

No Description!

Coordinates

chr3B:+:23019488..23021909

Molecular Weight (calculated)

67815.1 Da

IEP (calculated)

6.190

GRAVY (calculated)

-0.290

Length

620 amino acids

Sequence
(BLAST)

001: MAWALWFTML HEEVALAMKL TADGGSSTEE EAAIAMKLTE DGGSEDEEEE PALPVNLLEH HDGSCSEEAD GGLGGWASAG SSTLSVHHDH APPPLAATAE
101: DVPCAHRRKP SGRYVLAAHR ADEKDGLCRE ITCAPKPKVT YRVAGWVALE GGPSADSGHP VHVEVRTHEG ARVGGGVLVA EPGKWAEIKG AFRVDEHPRR
201: AEVYVHGPPA GVDIKVMDLR VCAVDKIARL RHLRKKTDKV RKRDVVLKFN PRSEDGNDDA AAAAVKGASI RVVQVENSFP IGACISKSSI QNPAFVDFFT
301: KHFDWAVLEN ELKWYYTEPV QGQVSYADAD ELIAFCDRLK KPVRGHCIFW AVENSVQPWV RALNTDQLRA AVESRIRGLV ARYSGRFPHY EVNNEMLHGA
401: FFRHRLGDDI DAHMFRETAA IDPAPALFVN DYNVESANDP NATPEKYVAL ITDLQRRGAA VGGIGVQGHV THPVGDVICD ALDKLAATEL PVWITELDVS
501: AADEAVRADD LEVVLREAFA HPAVEGIMLW GFMQGHMWRS HGQLLNADGT ISQAGNRFMG LRQEWTSHAR GKVDANGHFK FRGFHGKYVV ELAAGAGGKQ
601: VRRAFDVHKG DAPLVVDMNL

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.