Factsheet for TraesCS5B01G445500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G441600.1	Wheat	cytosol	95.26	95.26
TraesCS5D01G448800.1	Wheat	cytosol	94.35	94.7
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	85.25	90.0
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	85.97	86.13
TraesCS5B01G445300.1	Wheat	cytosol	81.42	81.27
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	82.15	77.76
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	28.6	70.09
Zm00001d016558_P001	Maize	plastid	43.72	55.56
KXG30265	Sorghum	plastid	61.75	52.97
TraesCS3B01G045600.1	Wheat	mitochondrion	62.66	52.92
TraesCS3B01G045700.2	Wheat	vacuole	57.74	51.13
TraesCS4B01G021800.1	Wheat	cytosol	47.54	35.9
TraesCS4B01G227000.1	Wheat	vacuole	29.14	28.52
TraesCS4B01G259400.1	Wheat	vacuole	28.6	26.93
TraesCS4B01G259100.1	Wheat	vacuole	27.87	26.84
TraesCS2B01G537100.1	Wheat	vacuole	27.32	26.13
TraesCS2B01G075000.1	Wheat	plastid	26.96	25.69
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	26.59	25.44
TraesCS2B01G144300.3	Wheat	mitochondrion	47.91	23.27

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	InterPro:GH10_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PFAM:PF02018	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF17
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS5B01G445500	EnsemblPlants:TraesCS5B01G445500.1	:

Description

No Description!

Coordinates

chr5B:-:617434808..617436665

Molecular Weight (calculated)

60824.9 Da

IEP (calculated)

5.498

GRAVY (calculated)

-0.271

Length

549 amino acids

Sequence
(BLAST)

001: MASTQDVSMD GSLVDYAPFG SSTTTLSVHN EEETGITVAV GGNEPSGRYI LVAGRADEKD GVRLPIPAGV LKPGTTYRVA GWISLGAGAA RGTSHPVRIH
101: LDVDDNGNET LVECGAVCAQ EGAWTEIMGA FRLRTEPRSA AVYVHGAPAG VDVKVMDVRV FPVDHKARFR QLKDKTDKAR KRDVILKLGA GAAASVRVVQ
201: LDNAFPFGTC INTSVIQKPA FLDFFTNHFD WAVFENELKW YHTEAQQGQL NYADADALLA FCDRLGKHVR GHCVFWSVDG DVQQWVKNLN KDQLRSAMQS
301: RLEGLVSRYA GRFRHYDVNN EMLHGRFFRD RLGDEDIPAY MFKEVARLDP EPALFVNDYN VERANDPNAT PEKYAEQVAW LQRCGAVVGG IGLQGHVQNP
401: VGEVICAAID RLAKTGVPIW FTELDVPEYN VSLRAKDLEV VLREAYAHPA VEGIVFWGFL QGTMWRENSW LVDADGTVNE AGQMFLNLQR EWKTDARGNV
501: DGDGNFKFRG FYGRYIVEVT TATGKHMLKT FTVEKGDTDT PLLVDLSDA

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.