Factsheet for HORVU5Hr1G106280.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole, cytosol

Predictor Summary:

vacuole 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, vacuole
Any Predictor:	cytosol, extracellular, vacuole
MultiLoc:	vacuole
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	90.15	95.0
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	89.96	87.57
TraesCS5B01G445500.1	Wheat	cytosol	86.13	85.97
TraesCS5A01G441600.1	Wheat	cytosol	85.95	85.79
TraesCS5D01G448800.1	Wheat	cytosol	85.22	85.37
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	87.59	84.66
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	28.83	70.54
HORVU5Hr1G106260.1	Barley	cytosol	43.25	65.65
Zm00001d016558_P001	Maize	plastid	45.8	58.1
KXG30265	Sorghum	plastid	63.5	54.38
HORVU3Hr1G007460.1	Barley	cytosol	62.23	50.59
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	57.48	45.19
HORVU4Hr1G003220.3	Barley	cytosol	46.53	34.55
HORVU2Hr1G113150.1	Barley	cytosol	27.74	28.36
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	27.74	26.03
HORVU5Hr1G056740.1	Barley	vacuole	28.1	26.01
HORVU1Hr1G023120.1	Barley	extracellular	26.64	25.39
HORVU4Hr1G070260.12	Barley	vacuole	28.1	25.2
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	27.19	24.67
HORVU4Hr1G063790.23	Barley	vacuole	25.55	24.65
HORVU2Hr1G021350.12	Barley	mitochondrion	48.18	23.93

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	UniProt:A0A287SM29	InterPro:GH10	InterPro:GH10_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0031176	GO:GO:0045493	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU5Hr1G106280	EnsemblPlants:HORVU5Hr1G106280.1	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF17	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	UniParc:UPI000B47AF87	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:623831717..623834310

Molecular Weight (calculated)

60347.9 Da

IEP (calculated)

5.510

GRAVY (calculated)

-0.209

Length

548 amino acids

Sequence
(BLAST)

001: MDGNLAGCVP FGTGTTTLSV HIEEEMAMLP VTVAVGGNKP SGRYVLVAGR ADEEDGLRLP IPVDTLKPRL TYRVAGWISL GAARGTSHPV RIDLGVEDNG
101: NETLVECGAV CAKEGGWSEI MGAFRLRTEP RSAAVYVHGA PAGVDVKVMD LRVYPVDHKA RFRQLKDKTD KARKRDVILK LGTPAGAGAG AAASVRVVQL
201: DNAFPFGTCI NTSVIQKPAF LDFFTNHLDW AVFENELKWY HTEVQQGQLN YADADALLAF CDRLGKTVRG HCVFWSVDGD VQQWVKNLNK DQLRSAMQSR
301: LEGLVSRYAG RFKHYDVNNE MLHGRFFRDR LGDEDVPAYM FKEVARLDPE PALFVNDYNV ECGNDPNATP EKYADQVAWL QSCGAVVRGI GLQGHISNPV
401: GEVICGALDR LAATGVPVWF TELDVCEADV GLRAQDLEVV LREAYAHPAV EGIVFWGIMQ GKMWRKDAWL VDADGTVNEA GQMLMNLHKE WKTDARGNVD
501: NDGNFKFRGF HGRYVVEVTT TATGKEMLKT FTVEKGDNTP LLVDLADV

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.