Factsheet for HORVU2Hr1G113150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G510500.1	Wheat	vacuole	92.54	86.41
TraesCS2B01G537100.1	Wheat	vacuole	92.16	86.06
HORVU1Hr1G023120.1	Barley	extracellular	76.49	71.3
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	64.55	59.25
HORVU5Hr1G056740.1	Barley	vacuole	63.62	57.6
Os10t0351600-00	Rice	cytosol	60.63	55.37
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	50.0	47.1
HORVU4Hr1G070260.12	Barley	vacuole	50.19	44.03
KRH29254	Soybean	cytosol	45.9	43.46
AT4G33830.1	Thale cress	vacuole	46.64	43.4
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	46.27	43.28
VIT_03s0091g00900.t01	Wine grape	cytosol	44.78	43.09
VIT_03s0091g00880.t01	Wine grape	vacuole	47.76	43.03
Bra034585.1-P	Field mustard	vacuole	45.71	42.76
CDY69164	Canola	vacuole	45.71	42.76
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	43.84	42.65
AT4G33840.1	Thale cress	vacuole	45.71	42.53
VIT_03s0091g00950.t01	Wine grape	cytosol	43.47	42.21
AT4G33860.1	Thale cress	plasma membrane, vacuole	45.15	42.01
CDY28323	Canola	vacuole	43.66	42.01
CDY48434	Canola	vacuole	44.59	41.71
Bra034584.1-P	Field mustard	vacuole	44.22	41.36
KRH29253	Soybean	extracellular, vacuole	42.91	40.64
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	43.47	40.59
CDY48433	Canola	vacuole	43.66	40.41
CDY49378	Canola	plasma membrane, vacuole	43.1	40.38
CDY28325	Canola	vacuole	43.28	40.07
PGSC0003DMT400037865	Potato	cytosol	42.16	39.79
Solyc05g051260.2.1	Tomato	golgi, vacuole	41.79	38.82
Solyc01g106990.1.1	Tomato	vacuole	41.6	38.65
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	40.3	36.92
Bra017609.1-P	Field mustard	nucleus	45.34	36.43
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	36.57	32.45
HORVU4Hr1G063790.23	Barley	vacuole	32.65	30.81
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	27.61	28.46
CDX72434	Canola	cytosol, vacuole	45.52	27.82
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	28.36	27.74
GSMUA_Achr1P12520_001	Banana	mitochondrion	46.64	27.29
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	28.17	26.82
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	27.61	26.1
GSMUA_Achr1P12510_001	Banana	cytosol	46.08	25.78
HORVU3Hr1G007460.1	Barley	cytosol	28.73	22.85
HORVU4Hr1G003220.3	Barley	cytosol	29.1	21.14
HORVU5Hr1G106260.1	Barley	cytosol	14.18	21.05
Solyc01g106980.1.1	Tomato	cytosol	43.1	20.92
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	26.49	20.37
HORVU2Hr1G021350.12	Barley	mitochondrion	27.05	13.15

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A287JH94	InterPro:CenC_carb-bd	InterPro:GH10
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0045493	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU2Hr1G113150	EnsemblPlants:HORVU2Hr1G113150.1	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF8	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	UniParc:UPI000B463A5E	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:727491030..727492951

Molecular Weight (calculated)

59461.6 Da

IEP (calculated)

6.662

GRAVY (calculated)

-0.244

Length

536 amino acids

Sequence
(BLAST)

001: MRSLYKGGIL QNSEFDSGLM GWLVPPGVKA GVNSSQSGNK FADAKNKGQP SHSVYQKIQM QTNHHYSLSA WLQVSSGTAV VKAIFLAPNG AYIGGGAVVA
101: KSGCWSMLKG GMTAYSSGPA EFFFEADGRV DILVDSVSLQ PFTFAEWRNH TSQSADKVRK SAVKVVARGA DGVPLANAEL SVKLLRPGFP LGNAMTKEIL
201: DIPAYEKWFT SRFTVASFEN EMKWYSTEWK RNREDYSVPD AMLALAQRHG IKVRGHNVFW DTNNTQMAWV NPLSADELKA AMQKRLSSLV TRYAGKVIAW
301: DVVNENLHGQ FYESRLGPNV SAELYQQVAK IDTNATLFMN EYDTLEWALD VTAMASKYAA KMEQIRSYPG NDGIKLAVGL ESHFETPNIP YMRATLDMLA
401: QLKVPIWLTE VDVSPKTRPY QVEYLEDVLR EGYGHPNVEG MVLWAAWHKH GCWVMCLTDN NFTNLPTGNV VDKLIDEWKT HPVAATTDAH GVAELDLVHG
501: EYRFTVTHPS LESPMAHTLT VDASSSALEH AIDIKV

Best Arabidopsis Sequence Match ( AT4G33810.5 )
(BLAST)

001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.