Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • endoplasmic reticulum 4
  • golgi 4
  • extracellular 5
  • vacuole 5
  • plasma membrane 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G33830.1 Thale cress vacuole 83.33 83.33
CDY69164 Canola vacuole 80.56 80.98
Bra034585.1-P Field mustard vacuole 79.51 79.93
CDY28323 Canola vacuole 77.08 79.71
AT4G33860.1 Thale cress plasma membrane, vacuole 79.69 79.69
CDY48434 Canola vacuole 79.17 79.58
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 78.99 79.41
Bra034584.1-P Field mustard vacuole 78.82 79.23
CDY49378 Canola plasma membrane, vacuole 73.78 74.3
Bra017609.1-P Field mustard nucleus 76.22 65.82
KRH29254 Soybean cytosol 54.17 55.12
VIT_03s0091g00890.t01 Wine grape extracellular, vacuole 52.26 54.63
VIT_03s0091g00900.t01 Wine grape cytosol 52.6 54.4
VIT_03s0091g00880.t01 Wine grape vacuole 55.9 54.12
VIT_03s0091g00950.t01 Wine grape cytosol 51.39 53.62
KRH29253 Soybean extracellular, vacuole 51.56 52.47
Zm00001d028103_P001 Maize extracellular, vacuole 51.91 51.55
GSMUA_Achr1P12500_001 Banana extracellular, vacuole 50.52 51.14
EER92683 Sorghum vacuole 51.56 50.86
CDX72434 Canola cytosol, vacuole 77.43 50.86
Os03t0201901-00 Rice cytosol 50.17 50.7
TraesCS4B01G259100.1 Wheat vacuole 49.83 50.35
TraesCS4D01G259500.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.65 50.18
TraesCS4D01G259100.1 Wheat vacuole 50.52 49.91
KXG39936 Sorghum extracellular, vacuole 50.0 49.91
TraesCS4A01G045500.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.48 49.65
TraesCS4B01G259400.1 Wheat vacuole 50.17 49.57
Os03t0201500-01 Rice vacuole 49.13 49.3
Zm00001d048151_P001 Maize vacuole 49.48 49.05
TraesCS4A01G045800.1 Wheat vacuole 49.48 48.89
Solyc01g106990.1.1 Tomato vacuole 48.26 48.18
Os10t0351700-01 Rice plasma membrane 47.4 46.99
HORVU4Hr1G070260.12 Barley vacuole 49.83 46.97
HORVU5Hr1G056740.1 Barley vacuole 47.4 46.11
TraesCS5D01G194800.1 Wheat plasma membrane, vacuole 46.88 46.0
TraesCS1B01G124500.1 Wheat endoplasmic reticulum, extracellular, vacuole 45.83 45.99
HORVU1Hr1G023120.1 Barley extracellular 45.83 45.91
Zm00001d030468_P001 Maize cytosol 46.88 45.84
TraesCS5A01G196500.1 Wheat plasma membrane, vacuole 46.7 45.83
TraesCS5A01G196600.1 Wheat plasma membrane, vacuole 46.7 45.83
TraesCS1D01G107700.1 Wheat extracellular, vacuole 45.66 45.82
TraesCS1A01G107100.1 Wheat extracellular, vacuole 45.66 45.82
HORVU2Hr1G113150.1 Barley cytosol 42.53 45.71
TraesCSU01G021800.1 Wheat extracellular, vacuole 46.18 45.47
HORVU2Hr1G122890.1 Barley endoplasmic reticulum, plasma membrane, vacuole 45.49 44.86
KXG34533 Sorghum endoplasmic reticulum, plasma membrane, vacuole 46.88 44.85
TraesCS2B01G537100.1 Wheat vacuole 44.1 44.25
TraesCS2D01G510500.1 Wheat vacuole 44.1 44.25
TraesCS2A01G584800.1 Wheat plastid, vacuole 45.66 43.19
Zm00001d048152_P001 Maize cytosol, extracellular, vacuole 49.13 43.01
Solyc01g107000.1.1 Tomato endoplasmic reticulum 43.4 42.73
EER92684 Sorghum endoplasmic reticulum, extracellular, vacuole 41.67 41.96
PGSC0003DMT400037865 Potato cytosol 40.97 41.55
Solyc05g051260.2.1 Tomato golgi, vacuole 40.8 40.73
Os10t0351600-00 Rice cytosol 40.28 39.52
AT4G38300.1 Thale cress mitochondrion 18.92 39.35
AT4G33810.3 Thale cress extracellular, vacuole 37.67 38.14
AT4G33820.1 Thale cress extracellular, vacuole 36.63 37.02
AT4G38650.1 Thale cress vacuole 36.11 37.01
Os03t0201800-01 Rice extracellular 37.33 36.94
AT2G14690.1 Thale cress vacuole 34.72 35.09
GSMUA_Achr1P12520_001 Banana mitochondrion 46.53 29.26
GSMUA_Achr1P12510_001 Banana cytosol 44.62 26.83
Solyc01g106980.1.1 Tomato cytosol 47.4 24.73
AT4G08160.1 Thale cress cytosol 25.17 19.28
AT1G58370.2 Thale cress cytosol 26.22 15.98
AT1G10050.3 Thale cress endoplasmic reticulum, plasma membrane, vacuole 26.56 13.97
Protein Annotations
Gene3D:2.60.120.260Gene3D:3.20.20.80MapMan:35.1EntrezGene:829526ProteinID:AEE86283.1EMBL:AK227024
ArrayExpress:AT4G33840EnsemblPlantsGene:AT4G33840RefSeq:AT4G33840TAIR:AT4G33840RefSeq:AT4G33840-TAIR-GEnsemblPlants:AT4G33840.1
TAIR:AT4G33840.1Unigene:At.31549EMBL:BT010469InterPro:CenC_carb-bdInterPro:GH10GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798InterPro:Galactose-bd-like_sfInterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979RefSeq:NP_195110.3
PFAM:PF00331PFAM:PF02018PFscan:PS51760PANTHER:PTHR31490PANTHER:PTHR31490:SF2UniProt:Q6NQI6
SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0000196EC3SEG:seg
Description
At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
Coordinates
chr4:-:16223501..16226153
Molecular Weight (calculated)
64881.6 Da
IEP (calculated)
7.117
GRAVY (calculated)
-0.407
Length
576 amino acids
Sequence
(BLAST)
001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.