Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- vacuole 5
- plasma membrane 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT4G33830.1 | Thale cress | vacuole | 83.33 | 83.33 |
CDY69164 | Canola | vacuole | 80.56 | 80.98 |
Bra034585.1-P | Field mustard | vacuole | 79.51 | 79.93 |
CDY28323 | Canola | vacuole | 77.08 | 79.71 |
AT4G33860.1 | Thale cress | plasma membrane, vacuole | 79.69 | 79.69 |
CDY48434 | Canola | vacuole | 79.17 | 79.58 |
CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.99 | 79.41 |
Bra034584.1-P | Field mustard | vacuole | 78.82 | 79.23 |
CDY49378 | Canola | plasma membrane, vacuole | 73.78 | 74.3 |
Bra017609.1-P | Field mustard | nucleus | 76.22 | 65.82 |
KRH29254 | Soybean | cytosol | 54.17 | 55.12 |
VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 52.26 | 54.63 |
VIT_03s0091g00900.t01 | Wine grape | cytosol | 52.6 | 54.4 |
VIT_03s0091g00880.t01 | Wine grape | vacuole | 55.9 | 54.12 |
VIT_03s0091g00950.t01 | Wine grape | cytosol | 51.39 | 53.62 |
KRH29253 | Soybean | extracellular, vacuole | 51.56 | 52.47 |
Zm00001d028103_P001 | Maize | extracellular, vacuole | 51.91 | 51.55 |
GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 50.52 | 51.14 |
EER92683 | Sorghum | vacuole | 51.56 | 50.86 |
CDX72434 | Canola | cytosol, vacuole | 77.43 | 50.86 |
Os03t0201901-00 | Rice | cytosol | 50.17 | 50.7 |
TraesCS4B01G259100.1 | Wheat | vacuole | 49.83 | 50.35 |
TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.65 | 50.18 |
TraesCS4D01G259100.1 | Wheat | vacuole | 50.52 | 49.91 |
KXG39936 | Sorghum | extracellular, vacuole | 50.0 | 49.91 |
TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.48 | 49.65 |
TraesCS4B01G259400.1 | Wheat | vacuole | 50.17 | 49.57 |
Os03t0201500-01 | Rice | vacuole | 49.13 | 49.3 |
Zm00001d048151_P001 | Maize | vacuole | 49.48 | 49.05 |
TraesCS4A01G045800.1 | Wheat | vacuole | 49.48 | 48.89 |
Solyc01g106990.1.1 | Tomato | vacuole | 48.26 | 48.18 |
Os10t0351700-01 | Rice | plasma membrane | 47.4 | 46.99 |
HORVU4Hr1G070260.12 | Barley | vacuole | 49.83 | 46.97 |
HORVU5Hr1G056740.1 | Barley | vacuole | 47.4 | 46.11 |
TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 46.88 | 46.0 |
TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.83 | 45.99 |
HORVU1Hr1G023120.1 | Barley | extracellular | 45.83 | 45.91 |
Zm00001d030468_P001 | Maize | cytosol | 46.88 | 45.84 |
TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 46.7 | 45.83 |
TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 46.7 | 45.83 |
TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 45.66 | 45.82 |
TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 45.66 | 45.82 |
HORVU2Hr1G113150.1 | Barley | cytosol | 42.53 | 45.71 |
TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 46.18 | 45.47 |
HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 45.49 | 44.86 |
KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 46.88 | 44.85 |
TraesCS2B01G537100.1 | Wheat | vacuole | 44.1 | 44.25 |
TraesCS2D01G510500.1 | Wheat | vacuole | 44.1 | 44.25 |
TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 45.66 | 43.19 |
Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 49.13 | 43.01 |
Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 43.4 | 42.73 |
EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 41.67 | 41.96 |
PGSC0003DMT400037865 | Potato | cytosol | 40.97 | 41.55 |
Solyc05g051260.2.1 | Tomato | golgi, vacuole | 40.8 | 40.73 |
Os10t0351600-00 | Rice | cytosol | 40.28 | 39.52 |
AT4G38300.1 | Thale cress | mitochondrion | 18.92 | 39.35 |
AT4G33810.3 | Thale cress | extracellular, vacuole | 37.67 | 38.14 |
AT4G33820.1 | Thale cress | extracellular, vacuole | 36.63 | 37.02 |
AT4G38650.1 | Thale cress | vacuole | 36.11 | 37.01 |
Os03t0201800-01 | Rice | extracellular | 37.33 | 36.94 |
AT2G14690.1 | Thale cress | vacuole | 34.72 | 35.09 |
GSMUA_Achr1P12520_001 | Banana | mitochondrion | 46.53 | 29.26 |
GSMUA_Achr1P12510_001 | Banana | cytosol | 44.62 | 26.83 |
Solyc01g106980.1.1 | Tomato | cytosol | 47.4 | 24.73 |
AT4G08160.1 | Thale cress | cytosol | 25.17 | 19.28 |
AT1G58370.2 | Thale cress | cytosol | 26.22 | 15.98 |
AT1G10050.3 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 26.56 | 13.97 |
Protein Annotations
Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | EntrezGene:829526 | ProteinID:AEE86283.1 | EMBL:AK227024 |
ArrayExpress:AT4G33840 | EnsemblPlantsGene:AT4G33840 | RefSeq:AT4G33840 | TAIR:AT4G33840 | RefSeq:AT4G33840-TAIR-G | EnsemblPlants:AT4G33840.1 |
TAIR:AT4G33840.1 | Unigene:At.31549 | EMBL:BT010469 | InterPro:CenC_carb-bd | InterPro:GH10 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | RefSeq:NP_195110.3 |
PFAM:PF00331 | PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | UniProt:Q6NQI6 |
SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0000196EC3 | SEG:seg |
Description
At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
Coordinates
chr4:-:16223501..16226153
Molecular Weight (calculated)
64881.6 Da
IEP (calculated)
7.117
GRAVY (calculated)
-0.407
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.