Factsheet for Os03t0201901-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G259100.1	Wheat	vacuole	78.07	76.33
Zm00001d028103_P001	Maize	extracellular, vacuole	77.37	76.03
EER92683	Sorghum	vacuole	77.72	75.86
TraesCS4B01G259400.1	Wheat	vacuole	76.49	74.79
TraesCS4A01G045800.1	Wheat	vacuole	76.14	74.44
Zm00001d048151_P001	Maize	vacuole	74.56	73.15
HORVU4Hr1G070260.12	Barley	vacuole	76.67	71.52
Os03t0201500-01	Rice	vacuole	67.37	66.9
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	53.16	53.25
VIT_03s0091g00950.t01	Wine grape	cytosol	50.35	51.99
KRH29254	Soybean	cytosol	51.23	51.59
VIT_03s0091g00900.t01	Wine grape	cytosol	50.18	51.35
Os10t0351700-01	Rice	plasma membrane	52.11	51.12
VIT_03s0091g00880.t01	Wine grape	vacuole	52.98	50.76
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	48.6	50.27
AT4G33840.1	Thale cress	vacuole	50.7	50.17
CDY28323	Canola	vacuole	48.6	49.73
AT4G33830.1	Thale cress	vacuole	50.0	49.48
CDY48434	Canola	vacuole	49.65	49.39
CDY69164	Canola	vacuole	49.65	49.39
AT4G33860.1	Thale cress	plasma membrane, vacuole	49.82	49.31
Bra034584.1-P	Field mustard	vacuole	49.3	49.04
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	49.3	49.04
Bra034585.1-P	Field mustard	vacuole	48.95	48.69
KRH29253	Soybean	extracellular, vacuole	48.07	48.41
CDY49378	Canola	plasma membrane, vacuole	48.07	47.9
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	47.72	47.39
CDY48433	Canola	vacuole	47.89	47.15
CDY28325	Canola	vacuole	47.19	46.46
Os03t0243700-01	Rice	cytosol	32.63	46.04
Os10t0351600-00	Rice	cytosol	46.84	45.49
Os03t0201800-01	Rice	extracellular	45.79	44.85
Solyc01g106990.1.1	Tomato	vacuole	43.86	43.33
PGSC0003DMT400037865	Potato	cytosol	43.16	43.31
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	44.21	43.08
Bra017609.1-P	Field mustard	nucleus	49.3	42.13
Solyc05g051260.2.1	Tomato	golgi, vacuole	42.11	41.59
Os05t0304900-01	Rice	extracellular, vacuole	35.26	40.69
CDX72434	Canola	cytosol, vacuole	50.18	32.61
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	12.11	30.8
GSMUA_Achr1P12520_001	Banana	mitochondrion	49.47	30.79
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	19.47	30.16
GSMUA_Achr1P12510_001	Banana	cytosol	47.37	28.18
Os01t0134900-01	Rice	extracellular	27.19	27.83
Solyc01g106980.1.1	Tomato	cytosol	44.91	23.19
Os03t0672900-00	Rice	extracellular	29.47	22.22
Os07t0456700-01	Rice	plasma membrane	30.35	15.71

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A0P0VUB0	ProteinID:BAS82830.1	InterPro:CenC_carb-bd
InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0045493
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	EnsemblPlantsGene:Os03g0201901	EnsemblPlants:Os03t0201901-00
PFAM:PF00331	PFAM:PF02018	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF13	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI000393BCC1	:	:	:

Description

Glycoside hydrolase, family 10 domain containing protein. (Os03t0201901-00)

Coordinates

chr3:-:5331153..5335603

Molecular Weight (calculated)

62828.9 Da

IEP (calculated)

6.770

GRAVY (calculated)

-0.310

Length

570 amino acids

Sequence
(BLAST)

001: VKEARVSFIS PAAEAASGMA RPLAYDYSSS SECLPEPMDA HYGGGIIRNG DFSAGLQGWS AFGYGSLAVG SSPAGNRYAV ATNRTRPYQS VSQKVLLQDD
101: THYTLSAWLQ VSDGIADVRA VVKTAGGDFI HSGGVEARSG CWSILKGGLT AAAAGQAELY FESNATVDIW VDNVSLQPFS REEWSAHHGA AIKKARKKTV
201: RLQARDAAGN PVAGARMHIE HVRNGFPLGS AMSKEILTNP GYQRWFTSRF TVTTFENEMK WYSTEAIPGR EDYSVPDAML RFAKSHGIAV RGHNIFWDDP
301: STQMGWVKAL SGEQLRRATE KRIKSVMSRY SGQVIAWDVV NENLHFDFFE GRFGWEASAA FYRKAHQMDG GALMSMNEFN TLEQPGDLTV LPGKYLRKLW
401: QIKAFPGNGN AARMGIGLEG HFSAQPNIPY IRAALDTMAQ ANAPIWLTEI DVAPGPDQAR HLEQILREVY AHPAVHGIIL WTAWHPQGCY VMCLTDNNFK
501: NLPAGDVVDK LIWEWKTRSH VGVADADGYY ETELFHGDYK VTVTHPAANS TVAQSLSVDR ESDNEFTIHV

Best Arabidopsis Sequence Match ( AT4G33840.1 )
(BLAST)

001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV

Arabidopsis Description

At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.