Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33840.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 76.59 | 76.07 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 76.42 | 75.64 |
| Zm00001d030468_P001 | Maize | cytosol | 76.42 | 75.38 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 75.9 | 75.13 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 75.9 | 75.13 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 75.39 | 75.0 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 75.56 | 74.16 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 75.73 | 73.09 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 76.08 | 72.58 |
| Os10t0351600-00 | Rice | cytosol | 57.49 | 56.9 |
| Os03t0201500-01 | Rice | vacuole | 52.15 | 52.79 |
| Os03t0201901-00 | Rice | cytosol | 51.12 | 52.11 |
| Os03t0201800-01 | Rice | extracellular | 50.26 | 50.17 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 47.33 | 48.33 |
| AT4G33830.1 | Thale cress | vacuole | 47.85 | 48.26 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 47.33 | 47.99 |
| KRH29254 | Soybean | cytosol | 46.64 | 47.88 |
| CDY28323 | Canola | vacuole | 45.78 | 47.76 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 45.27 | 47.73 |
| CDY69164 | Canola | vacuole | 46.99 | 47.64 |
| Bra034585.1-P | Field mustard | vacuole | 46.99 | 47.64 |
| AT4G33840.1 | Thale cress | vacuole | 46.99 | 47.4 |
| CDY48434 | Canola | vacuole | 45.96 | 46.6 |
| Bra034584.1-P | Field mustard | vacuole | 45.61 | 46.25 |
| AT4G33860.1 | Thale cress | plasma membrane, vacuole | 45.27 | 45.66 |
| KRH29253 | Soybean | extracellular, vacuole | 43.89 | 45.05 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 45.78 | 44.71 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 42.0 | 44.2 |
| Bra034586.1-P | Field mustard | endoplasmic reticulum, vacuole | 43.55 | 44.08 |
| CDY48433 | Canola | vacuole | 43.89 | 44.04 |
| CDY28325 | Canola | vacuole | 43.89 | 44.04 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 42.0 | 43.81 |
| CDY49378 | Canola | plasma membrane, vacuole | 42.86 | 43.53 |
| Solyc01g106990.1.1 | Tomato | vacuole | 42.69 | 42.98 |
| Os03t0243700-01 | Rice | cytosol | 28.57 | 41.09 |
| PGSC0003DMT400037865 | Potato | cytosol | 39.76 | 40.67 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 40.1 | 40.38 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 40.62 | 40.34 |
| Bra017609.1-P | Field mustard | nucleus | 44.23 | 38.53 |
| Os05t0304900-01 | Rice | extracellular, vacuole | 30.81 | 36.23 |
| CDX72434 | Canola | cytosol, vacuole | 44.75 | 29.65 |
| Os05t0319900-00 | Rice | cytosol, mitochondrion, plastid, vacuole | 11.36 | 29.46 |
| Os01t0134800-01 | Rice | extracellular, mitochondrion, vacuole | 17.56 | 27.72 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 43.2 | 27.4 |
| Os01t0134900-01 | Rice | extracellular | 25.3 | 26.39 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 42.51 | 25.78 |
| Solyc01g106980.1.1 | Tomato | cytosol | 43.03 | 22.64 |
| Os03t0672900-00 | Rice | extracellular | 27.88 | 21.43 |
| Os07t0456700-01 | Rice | plasma membrane | 25.65 | 13.53 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | UniProt:A0A0P0XT95 | ProteinID:BAT10471.1 | InterPro:GH10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0045493 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | EnsemblPlantsGene:Os10g0351700 | EnsemblPlants:Os10t0351700-01 | PFAM:PF00331 |
| PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF8 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | UniParc:UPI000393C19B | SEG:seg | : | : | : |
Description
Similar to Glycosyl hydrolase family 10 protein, expressed. (Os10t0351700-01)
Coordinates
chr10:+:10727319..10730929
Molecular Weight (calculated)
64299.0 Da
IEP (calculated)
8.336
GRAVY (calculated)
-0.173
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: KVFMEKVLVL SLICISLCQG WVVQSLEYDH TASIECLRDP MKPLYNGGII QNGEFNSGLM GWSTHRDIKA GLSSSPSGNK FAVVQRADSL SGAAVPSRSV
101: YQKIQLQGDT HYSLSAWLQV SAGAAHVKAF VKTPNGERVV AGSVSAQSGC WSMLKGGMTA YSSGPGQIFF ESDAPVDIWM DSVSLQPFTF DEWDAHRQQS
201: AAKVRRSTVR VVVRGADGAP MANATVIVEL LRAGFPFGNA LTKEILDLPA YEKWFTSRFT VATFENEMKW YSNEWAQNNE DYRVADAMLK LAQKYNIKIR
301: GHNVFWDDQN SQMKWVTPLN LDQLKAAMQK RLKSVVTRYA GKVIHWDVVN ENLHFNFFET KLGPNASPMI YNQVGALDKN AILFMNEFNT LEQPGDPNPV
401: PSKYVAKMKQ IQSYPGNSAL KLGVGLESHF STPNIPYMRS ALDTLAQLKL PMWLTEVDVV KGPNQVKFLE QVLREGYAHP SVNGMIMWAA WHAKGCYVMC
501: LTDNSFKNLP VGTLVDKLIA EWKTHKTAAT TGADGAVELD LPHGDYNLTV SHPSLGTNAT VRAMTVDAAS LASERLVNIK V
101: YQKIQLQGDT HYSLSAWLQV SAGAAHVKAF VKTPNGERVV AGSVSAQSGC WSMLKGGMTA YSSGPGQIFF ESDAPVDIWM DSVSLQPFTF DEWDAHRQQS
201: AAKVRRSTVR VVVRGADGAP MANATVIVEL LRAGFPFGNA LTKEILDLPA YEKWFTSRFT VATFENEMKW YSNEWAQNNE DYRVADAMLK LAQKYNIKIR
301: GHNVFWDDQN SQMKWVTPLN LDQLKAAMQK RLKSVVTRYA GKVIHWDVVN ENLHFNFFET KLGPNASPMI YNQVGALDKN AILFMNEFNT LEQPGDPNPV
401: PSKYVAKMKQ IQSYPGNSAL KLGVGLESHF STPNIPYMRS ALDTLAQLKL PMWLTEVDVV KGPNQVKFLE QVLREGYAHP SVNGMIMWAA WHAKGCYVMC
501: LTDNSFKNLP VGTLVDKLIA EWKTHKTAAT TGADGAVELD LPHGDYNLTV SHPSLGTNAT VRAMTVDAAS LASERLVNIK V
001: MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV
Arabidopsis Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU7]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.