Factsheet for Solyc05g051260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037865	Potato	cytosol	90.64	92.08
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	49.57	48.89
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	46.45	48.64
Solyc01g106990.1.1	Tomato	vacuole	47.49	47.49
VIT_03s0091g00880.t01	Wine grape	vacuole	48.35	46.89
VIT_03s0091g00950.t01	Wine grape	cytosol	44.19	46.2
VIT_03s0091g00900.t01	Wine grape	cytosol	44.19	45.78
KRH29254	Soybean	cytosol	43.5	44.35
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	43.5	43.8
AT4G33860.1	Thale cress	plasma membrane, vacuole	43.67	43.75
CDY69164	Canola	vacuole	43.33	43.63
Bra034585.1-P	Field mustard	vacuole	43.15	43.46
CDY28323	Canola	vacuole	41.59	43.09
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	42.46	43.06
KXG39936	Sorghum	extracellular, vacuole	42.98	42.98
CDY48434	Canola	vacuole	42.63	42.93
AT4G33830.1	Thale cress	vacuole	42.81	42.88
Bra034584.1-P	Field mustard	vacuole	42.46	42.76
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	42.29	42.51
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.94	42.46
CDY48433	Canola	vacuole	42.46	42.31
Os03t0201901-00	Rice	cytosol	41.59	42.11
TraesCS4B01G259100.1	Wheat	vacuole	41.59	42.11
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.77	41.99
CDY28325	Canola	vacuole	42.11	41.97
HORVU2Hr1G113150.1	Barley	cytosol	38.82	41.79
Os03t0201500-01	Rice	vacuole	41.07	41.29
CDY49378	Canola	plasma membrane, vacuole	40.73	41.08
Zm00001d028103_P001	Maize	extracellular, vacuole	41.25	41.03
KRH29253	Soybean	extracellular, vacuole	40.21	40.99
EER92683	Sorghum	vacuole	41.42	40.92
AT4G33840.1	Thale cress	vacuole	40.73	40.8
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	40.38	40.59
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.38	40.59
HORVU1Hr1G023120.1	Barley	extracellular	40.38	40.52
Zm00001d048151_P001	Maize	vacuole	40.55	40.28
TraesCS4D01G259100.1	Wheat	vacuole	40.55	40.14
Os10t0351700-01	Rice	plasma membrane	40.38	40.1
TraesCS2B01G537100.1	Wheat	vacuole	39.86	40.07
TraesCS4B01G259400.1	Wheat	vacuole	40.38	39.97
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	39.69	39.9
TraesCSU01G021800.1	Wheat	extracellular, vacuole	40.21	39.66
TraesCS2D01G510500.1	Wheat	vacuole	39.17	39.37
HORVU5Hr1G056740.1	Barley	vacuole	40.38	39.36
TraesCS4A01G045800.1	Wheat	vacuole	39.69	39.28
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	39.69	39.01
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	39.51	38.84
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	39.51	38.84
Zm00001d030468_P001	Maize	cytosol	39.17	38.37
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	38.82	38.36
HORVU4Hr1G070260.12	Barley	vacuole	40.21	37.97
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	39.51	37.87
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	42.81	37.54
Solyc01g105500.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	37.26	37.46
TraesCS2A01G584800.1	Wheat	plastid, vacuole	39.34	37.27
Solyc11g043160.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	37.44	37.24
Bra017609.1-P	Field mustard	nucleus	42.81	37.03
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	34.49	34.79
Os03t0201800-01	Rice	extracellular	34.14	33.85
Solyc01g111340.2.1	Tomato	extracellular	31.72	33.46
Solyc11g040330.1.1	Tomato	extracellular	31.54	33.15
Os10t0351600-00	Rice	cytosol	33.62	33.05
Solyc10g055340.1.1	Tomato	cytosol	12.48	32.73
Solyc10g055370.1.1	Tomato	vacuole	31.72	32.62
CDX72434	Canola	cytosol, vacuole	42.11	27.71
GSMUA_Achr1P12520_001	Banana	mitochondrion	38.13	24.02
Solyc01g106980.1.1	Tomato	cytosol	45.41	23.73
Solyc04g077200.1.1	Tomato	cytosol	3.99	22.33
GSMUA_Achr1P12510_001	Banana	cytosol	36.4	21.92
Solyc12g088210.1.1	Tomato	mitochondrion	26.0	16.29
Solyc04g077190.2.1	Tomato	extracellular	26.86	13.55

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	UniProt:K4C1F7
PFAM:PF00331	PFAM:PF02018	PFscan:PS51257	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF2
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:Solyc05g051260.2	EnsemblPlants:Solyc05g051260.2.1	TMHMM:TMhelix
UniParc:UPI00027656D8	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:61541949..61545008

Molecular Weight (calculated)

65847.1 Da

IEP (calculated)

6.592

GRAVY (calculated)

-0.376

Length

577 amino acids

Sequence
(BLAST)

001: MNTFKRDNVF CHILLISCFF LCAGFSVYAI DYDYHFTIKC LEEPLNPQYS GGIAKNPEIN DGLNGWTSFG SSKIETRTSK QGNTFIVASN RTQPNHSFSQ
101: TIHVEKNTMY TISAWLQVSH GKADVVAMIR TPNGDIPTGW AIAKSGCWSM LKGGFNGNFS GPAELYFESK DISSIELWAD SISIQPFTLL EWKAHQDQSI
201: EKTRKSKVKL LVVDHEGQPI PNATIMMKQT SSSFPIGNAM SSHILTNTGY QDWYNPRFKL TVFENEMKWW LTEALPNKND YHLADAMLQY VQNRSMLLRG
301: HNIVWENRDM LPQWAKDLPR PLLATAIERR FNSLVPRYRD KVMHWDVDNE NMHFSYLESQ TGENTVYYYK KAYDMDKTAL LFLNEWGTIE NPNDIDANPA
401: KYLAKIEEFR TLGYNGSLGI GLQGHFDTPV IPYIRSALDI LATANLPIWI TELDVSSRPL QADYLRDVLG ELYTHPGVQG IVFWSPWQPQ GCFKMCLTDN
501: DFNNLATGDV VDDFMRRINH QGLISNTNHD GYVETSLYHG DYEVIIKHST IKHQSFAHKI NVAKGKDSNT LMMKLSA

Best Arabidopsis Sequence Match ( AT4G33860.1 )
(BLAST)

001: MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVSP DVRDGTLGWT PFGNAKVDFR KIGNHNFFVA RDRKQPFDSV SQKVYLEKGL
101: LYTFSAWLQV SKGKAPVKAV FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ EEWNSHHEQS IQKERKRTVR
201: IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK
301: YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE
401: IRSIRVCGNI SLGIGLESHF KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS GYSPSGCYRM CLTDGNFKNV
501: PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV

Arabidopsis Description

Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU9]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.