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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G259100.1 Wheat vacuole 96.05 96.05
TraesCS4B01G259400.1 Wheat vacuole 95.2 95.2
HORVU4Hr1G070260.12 Barley vacuole 91.6 87.4
Os03t0201901-00 Rice cytosol 74.44 76.14
Zm00001d028103_P001 Maize extracellular, vacuole 73.07 73.45
EER92683 Sorghum vacuole 72.38 72.26
Zm00001d048151_P001 Maize vacuole 70.33 70.57
TraesCS4A01G045500.1 Wheat endoplasmic reticulum, extracellular, vacuole 63.64 64.63
GSMUA_Achr1P12500_001 Banana extracellular, vacuole 51.29 52.55
VIT_03s0091g00950.t01 Wine grape cytosol 48.89 51.63
TraesCS1A01G107100.1 Wheat extracellular, vacuole 50.77 51.57
VIT_03s0091g00900.t01 Wine grape cytosol 48.89 51.17
TraesCS5A01G196600.1 Wheat plasma membrane, vacuole 51.11 50.77
TraesCS5A01G196500.1 Wheat plasma membrane, vacuole 51.11 50.77
KRH29254 Soybean cytosol 48.89 50.35
AT4G33830.1 Thale cress vacuole 49.06 49.65
CDY28323 Canola vacuole 47.34 49.55
AT4G33840.1 Thale cress vacuole 48.89 49.48
AT4G33860.1 Thale cress plasma membrane, vacuole 48.54 49.13
CDY48434 Canola vacuole 48.2 49.04
TraesCS2A01G584800.1 Wheat plastid, vacuole 51.11 48.93
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 48.03 48.87
CDY69164 Canola vacuole 47.86 48.69
Bra034584.1-P Field mustard vacuole 47.68 48.52
Bra034585.1-P Field mustard vacuole 47.68 48.52
VIT_03s0091g00890.t01 Wine grape extracellular, vacuole 45.8 48.46
VIT_03s0091g00880.t01 Wine grape vacuole 49.4 48.4
CDY49378 Canola plasma membrane, vacuole 47.0 47.9
Bra034586.1-P Field mustard endoplasmic reticulum, vacuole 46.83 47.56
CDY48433 Canola vacuole 47.0 47.32
CDY28325 Canola vacuole 46.83 47.15
KRH29253 Soybean extracellular, vacuole 45.11 46.47
Solyc01g106990.1.1 Tomato vacuole 43.05 43.5
Solyc01g107000.1.1 Tomato endoplasmic reticulum 42.37 42.22
Bra017609.1-P Field mustard nucleus 47.68 41.68
PGSC0003DMT400037865 Potato cytosol 39.79 40.85
Solyc05g051260.2.1 Tomato golgi, vacuole 39.28 39.69
TraesCS2A01G061600.1 Wheat extracellular, plasma membrane, vacuole 36.54 38.31
TraesCS4A01G071100.2 Wheat vacuole 36.71 38.15
CDX72434 Canola cytosol, vacuole 48.89 32.5
GSMUA_Achr1P12520_001 Banana mitochondrion 47.17 30.02
TraesCS5A01G441700.1 Wheat cytosol 27.79 29.62
TraesCS5A01G441600.1 Wheat cytosol 27.27 28.96
TraesCS3A01G038200.1 Wheat cytosol 27.96 28.7
TraesCS5A01G441400.1 Wheat cytosol 26.59 27.98
GSMUA_Achr1P12510_001 Banana cytosol 44.94 27.35
TraesCS3A01G038000.1 Wheat cytosol 26.76 25.32
Solyc01g106980.1.1 Tomato cytosol 42.2 22.28
TraesCS4A01G292300.1 Wheat cytosol 27.79 21.98
TraesCS2A01G122200.1 Wheat mitochondrion 28.47 15.09
Protein Annotations
Gene3D:2.60.120.260Gene3D:3.20.20.80MapMan:35.1InterPro:CenC_carb-bdInterPro:GH10GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798InterPro:Galactose-bd-like_sfInterPro:Glycoside_hydrolase_SFInterPro:IPR001000InterPro:IPR008979PFAM:PF00331
PFAM:PF02018PFscan:PS51760PANTHER:PTHR31490PANTHER:PTHR31490:SF13SMART:SM00633SUPFAM:SSF49785
SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS4A01G045800EnsemblPlants:TraesCS4A01G045800.1SEG:seg
Description
No Description!
Coordinates
chr4A:-:37784011..37788205
Molecular Weight (calculated)
63823.8 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.224
Length
583 amino acids
Sequence
(BLAST)
001: MRASMGRSPS SPVLSLVWAA AALLLNAALM VQSVPYDYSS SSECLAEPLE AHYGGGVIVN SDFSAGLQDW SAFGYGSVAE GASPTGNKYA VAANRTRPYQ
101: SVSQKVYLQN DTHYTLSAWL QVSDRSADVI AVVKTADDFI HAGGVDAKSG CWSILKGGLT AAASGPAELY FESNSTVDVW VDNVSLQPFS KEEWSSHRHA
201: AVKKARKRTV RLRARDAAGN PVPGARVHVR QVRSAFPLGS AMSKEIITNV KYQEWFAKRF TVTTFENEMK WYSTEWTQGH EDYTVPDLML RFARSHGIAV
301: RGHNVFWDDP RTQLGWVKAL SCDQLRAAAA NRMRSVMSRY AGQVIAWDVV NENLHFDFFE EKFGAGASAA FYQKAHGMDG GALMSMNDFN TLEQPTDPNG
401: LPSKYLNKLS QIKDAFPGNG IGVRMAIGLE GHFGATPSIP YVRAALDTLS QAGVPIWVTE VDVKAGPDQA YHLEQVLREV YSHPAVHGIV LWTAWHPTGC
501: YVMCLTDDNF NNLPVGDTVD KLIAEWKTTS HVGVADADGH YDAELFHGDY QVTVTHPAAA ANSTVVQSLS VDRESDNEYT IHV
Best Arabidopsis Sequence Match ( AT4G33860.1 )
(BLAST)
001: MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVSP DVRDGTLGWT PFGNAKVDFR KIGNHNFFVA RDRKQPFDSV SQKVYLEKGL
101: LYTFSAWLQV SKGKAPVKAV FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ EEWNSHHEQS IQKERKRTVR
201: IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK
301: YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE
401: IRSIRVCGNI SLGIGLESHF KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS GYSPSGCYRM CLTDGNFKNV
501: PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV
Arabidopsis Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU9]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.