Factsheet for TraesCS3A01G038000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G045700.2	Wheat	vacuole	95.62	95.0
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	93.34	89.01
Zm00001d039958_P001	Maize	cytosol	35.71	82.4
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	92.53	81.78
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	45.13	75.54
EES00362	Sorghum	cytosol	69.32	71.89
TraesCS3A01G038200.1	Wheat	cytosol	55.36	60.04
TraesCS5A01G441600.1	Wheat	cytosol	51.95	58.29
TraesCS5A01G441700.1	Wheat	cytosol	50.65	57.04
TraesCS5A01G441400.1	Wheat	cytosol	50.49	56.14
TraesCS4A01G292300.1	Wheat	cytosol	43.34	36.23
TraesCS4A01G071100.2	Wheat	vacuole	26.14	28.7
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	25.0	27.7
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	25.65	27.53
TraesCS4A01G045800.1	Wheat	vacuole	25.32	26.76
TraesCS2A01G122200.1	Wheat	mitochondrion	46.1	25.82
TraesCS5A01G196500.1	Wheat	plasma membrane, vacuole	24.35	25.55
TraesCS5A01G196600.1	Wheat	plasma membrane, vacuole	24.35	25.55
TraesCS2A01G584800.1	Wheat	plastid, vacuole	23.86	24.14
TraesCS1A01G107100.1	Wheat	extracellular, vacuole	22.24	23.87

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF14	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS3A01G038000	EnsemblPlants:TraesCS3A01G038000.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:20546169..20548391

Molecular Weight (calculated)

67279.5 Da

IEP (calculated)

6.273

GRAVY (calculated)

-0.326

Length

616 amino acids

Sequence
(BLAST)

001: MHLHPPEELA LAMKLRADGG SSTEEESSIA MKLTEDGGSE DEEEEPALPV NLLEHRGGSC SELADGGLGG WASTGSSTLS VHHDHAPPPL SATAEDVPCA
101: HRRKPSGRYV LAAHRADEKD GLCREMPCAP KPKVTYRVAG WVALEGGPSA DGGHPVHVEV RTHDGARVGG GVLVAEPGKW AEIKGAFRVD EHPRHAEVYV
201: HGPPAGVDIK VMDMRVCAVD KIARLRHLRK KTDKVRKRDV VLKFNPRSED GADADAAAAA VKGASIRVVQ VENSFPIGAC ISKSSIQNPA FVDFFTKHFD
301: WAVLENELKW YYTEAVQGQV SYADADELIA FCDRLKKPVR GHCIFWAVEN SVQPWVRALN TDQLRAAVES RIRGLVSRYS GRFPHYEVNN EMLHGAFFRQ
401: RLGDDIDAHM FRETAAIDPA PALFVNDYNV ESANDPNATP EKYVALITDL QRRGAAVGGI GVQGHVTYPV GDVICDALDK LAATELPVWI TELDVSAADE
501: AVRADDLEVV LREAFAHPAV EGIMLWGFMQ GHMWRSHGQL VNADGTISQA GNRFMGLRQE WTSHARGKVD ANGHFKFRGF HGKYVVELAA GAGGKQVRRA
601: FDVHKGDEPL VVDMNL

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.