Factsheet for Os01t0134800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, vacuole

Predictor Summary:

nucleus 1
mitochondrion 3
vacuole 1
plastid 1
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039958_P001	Maize	cytosol	58.97	81.27
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	40.76	66.96
EES00362	Sorghum	cytosol	75.0	46.46
TraesCS3A01G038000.1	Wheat	cytosol	75.54	45.13
TraesCS3B01G045700.2	Wheat	vacuole	75.0	44.52
Os01t0134900-01	Rice	extracellular	65.49	43.27
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	74.46	42.41
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	76.36	40.32
Os03t0243700-01	Rice	cytosol	34.24	31.19
Os03t0672900-00	Rice	extracellular	52.99	25.79
Os05t0304900-01	Rice	extracellular, vacuole	31.79	23.68
Os03t0201500-01	Rice	vacuole	30.43	19.51
Os03t0201901-00	Rice	cytosol	30.16	19.47
Os10t0351600-00	Rice	cytosol	28.53	17.89
Os10t0351700-01	Rice	plasma membrane	27.72	17.56
Os07t0456700-01	Rice	plasma membrane	52.45	17.53
Os03t0201800-01	Rice	extracellular	27.17	17.18

Protein Annotations

MapMan:21.2.2.2.4	Gene3D:3.20.20.80	ProteinID:BAF03860.1	ProteinID:BAS70252.1	InterPro:GH10	InterPro:GH10_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	EnsemblPlantsGene:Os01g0134800	EnsemblPlants:Os01t0134800-01	PFAM:PF00331
PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF12	UniProt:Q0JQW8
SMART:SM00633	SUPFAM:SSF51445	UniParc:UPI0000DD8951	:	:	:

Description

Similar to (1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC 3.2.1.8) (Fragment). (Os01t0134800-01)

Coordinates

chr1:-:1906717..1908131

Molecular Weight (calculated)

41092.7 Da

IEP (calculated)

6.149

GRAVY (calculated)

-0.264

Length

368 amino acids

Sequence
(BLAST)

001: VRKRDVVLKL GRRTGGTAIR VVQVENSFPI GACINKTAIQ NPAFVDFFTK HFDWAVLENE LKWYYTEAVQ GQVSYSDADE LIAFCDRHGK PVRGHCIFWA
101: VENVVQPWVR ALNGDQLRAA VEGRLRSLVT RYGGRFPHYE VNNEMLHGAF FQQRLGDDIN ARMFRETAQM DPSPALFVND YNVESANDPN ATPERYVELV
201: TDLQKRGAAV GGIGVQGHVT HPVGDVICDA LDRLAVTGLP VWITELDVSA ADEAVRADDL EIVLREAFAH PAVEGIMLWG FMQGNMWRSH AHLVDADGKL
301: NEAGHRYVGL RQEWTSHARG QVDGSGHFKF RGFHGKYVVQ LTTGAGEMKY QQFDVGKGDG PLVLDMDL

Best Arabidopsis Sequence Match ( AT4G08160.1 )
(BLAST)

001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL

Arabidopsis Description

Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.